Gene : Medtr8g062750 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR20978:SF0 - SPLICING FACTOR 3B SUBUNIT 5 Description:  splicing factor 3B subunit 5/RDS3 complex subunit 10
Genomic Order:  3099 Name:  ? Medtr8g062750
Secondary Identifier:  ? PAC:31072898
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g062750 0.5kb upstream 0.5kb upstream 3315   true chr8: 26244777-26248091 Medicago truncatula
Medtr8g062750 0.5kb upstream 0.5kb upstream 500   false chr8: 26244777-26245276 Medicago truncatula
Medtr8g062750 0.5kb downstream 0.5kb downstream 3315   true chr8: 26245277-26248591 Medicago truncatula
Medtr8g062750 0.5kb downstream 0.5kb downstream 500   false chr8: 26248092-26248591 Medicago truncatula
Medtr8g062750 1.0kb upstream 1.0kb upstream 3815   true chr8: 26244277-26248091 Medicago truncatula
Medtr8g062750 1.0kb upstream 1.0kb upstream 1000   false chr8: 26244277-26245276 Medicago truncatula
Medtr8g062750 1.0kb downstream 1.0kb downstream 3815   true chr8: 26245277-26249091 Medicago truncatula
Medtr8g062750 1.0kb downstream 1.0kb downstream 1000   false chr8: 26248092-26249091 Medicago truncatula
Medtr8g062750 2.0kb upstream 2.0kb upstream 4815   true chr8: 26243277-26248091 Medicago truncatula
Medtr8g062750 2.0kb upstream 2.0kb upstream 2000   false chr8: 26243277-26245276 Medicago truncatula
Medtr8g062750 2.0kb downstream 2.0kb downstream 4815   true chr8: 26245277-26250091 Medicago truncatula
Medtr8g062750 2.0kb downstream 2.0kb downstream 2000   false chr8: 26248092-26250091 Medicago truncatula
Medtr8g062750 5.0kb upstream 5.0kb upstream 7815   true chr8: 26240277-26248091 Medicago truncatula
Medtr8g062750 5.0kb upstream 5.0kb upstream 5000   false chr8: 26240277-26245276 Medicago truncatula
Medtr8g062750 5.0kb downstream 5.0kb downstream 7815   true chr8: 26245277-26253091 Medicago truncatula
Medtr8g062750 5.0kb downstream 5.0kb downstream 5000   false chr8: 26248092-26253091 Medicago truncatula
Medtr8g062750 10.0kb upstream 10.0kb upstream 12815   true chr8: 26235277-26248091 Medicago truncatula
Medtr8g062750 10.0kb upstream 10.0kb upstream 10000   false chr8: 26235277-26245276 Medicago truncatula
Medtr8g062750 10.0kb downstream 10.0kb downstream 12815   true chr8: 26245277-26258091 Medicago truncatula
Medtr8g062750 10.0kb downstream 10.0kb downstream 10000   false chr8: 26248092-26258091 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027648 5273 Angiosperm View MSA
122312316 5265 Fabidae View MSA
124069097 5270 Rosid View MSA
123746421 5271 Pentapetalae View MSA
122791090 5272 Eudicot View MSA
123428927 5275 Viridiplantae View MSA
121347588 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.028     Low Low
cufflinks 0.893        
cufflinks 1.179        
cufflinks 0.06     Low  
cufflinks 1.726       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.111        
cufflinks 1.063        
cufflinks 0.086     Low  

0 Strain