Gene : Medtr8g062700 M. truncatula Mt4.0v1
Defline:  (1 of 3) PF08295 - Sin3 family co-repressor (Sin3_corepress) Description:  paired amphipathic helix SIN3-like protein
Genomic Order:  3094 Name:  ? Medtr8g062700
Secondary Identifier:  ? PAC:31069819
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g062700 0.5kb upstream 0.5kb upstream 17926   true chr8: 26198402-26216327 Medicago truncatula
Medtr8g062700 0.5kb upstream 0.5kb upstream 500   false chr8: 26215828-26216327 Medicago truncatula
Medtr8g062700 0.5kb downstream 0.5kb downstream 17926   true chr8: 26197902-26215827 Medicago truncatula
Medtr8g062700 0.5kb downstream 0.5kb downstream 500   false chr8: 26197902-26198401 Medicago truncatula
Medtr8g062700 1.0kb upstream 1.0kb upstream 18426   true chr8: 26198402-26216827 Medicago truncatula
Medtr8g062700 1.0kb upstream 1.0kb upstream 1000   false chr8: 26215828-26216827 Medicago truncatula
Medtr8g062700 1.0kb downstream 1.0kb downstream 18426   true chr8: 26197402-26215827 Medicago truncatula
Medtr8g062700 1.0kb downstream 1.0kb downstream 1000   false chr8: 26197402-26198401 Medicago truncatula
Medtr8g062700 2.0kb upstream 2.0kb upstream 19426   true chr8: 26198402-26217827 Medicago truncatula
Medtr8g062700 2.0kb upstream 2.0kb upstream 2000   false chr8: 26215828-26217827 Medicago truncatula
Medtr8g062700 2.0kb downstream 2.0kb downstream 19426   true chr8: 26196402-26215827 Medicago truncatula
Medtr8g062700 2.0kb downstream 2.0kb downstream 2000   false chr8: 26196402-26198401 Medicago truncatula
Medtr8g062700 5.0kb upstream 5.0kb upstream 22426   true chr8: 26198402-26220827 Medicago truncatula
Medtr8g062700 5.0kb upstream 5.0kb upstream 5000   false chr8: 26215828-26220827 Medicago truncatula
Medtr8g062700 5.0kb downstream 5.0kb downstream 22426   true chr8: 26193402-26215827 Medicago truncatula
Medtr8g062700 5.0kb downstream 5.0kb downstream 5000   false chr8: 26193402-26198401 Medicago truncatula
Medtr8g062700 10.0kb upstream 10.0kb upstream 27426   true chr8: 26198402-26225827 Medicago truncatula
Medtr8g062700 10.0kb upstream 10.0kb upstream 10000   false chr8: 26215828-26225827 Medicago truncatula
Medtr8g062700 10.0kb downstream 10.0kb downstream 27426   true chr8: 26188402-26215827 Medicago truncatula
Medtr8g062700 10.0kb downstream 10.0kb downstream 10000   false chr8: 26188402-26198401 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311868 5265 Fabidae View MSA
124067617 5270 Rosid View MSA
123752813 5271 Pentapetalae View MSA
122791038 5272 Eudicot View MSA
122047034 5273 Angiosperm View MSA
121346152 5274 Embryophyte View MSA
123428507 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.798        
cufflinks 1.125        
cufflinks 1.147        
cufflinks 0.155       Low
cufflinks 1.362       High
cufflinks 0.164       Low
cufflinks 0.442        
cufflinks 1.079        
cufflinks 0.367        

0 Strain