Gene : Medtr8g062790 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR11014//PTHR11014:SF85 - PEPTIDASE M20 FAMILY MEMBER Description:  IAA-amino acid hydrolase ILR1-like protein
Genomic Order:  3103 Name:  ? Medtr8g062790
Secondary Identifier:  ? PAC:31075172
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g062790 0.5kb upstream 0.5kb upstream 4280   true chr8: 26261983-26266262 Medicago truncatula
Medtr8g062790 0.5kb upstream 0.5kb upstream 500   false chr8: 26261983-26262482 Medicago truncatula
Medtr8g062790 0.5kb downstream 0.5kb downstream 4280   true chr8: 26262483-26266762 Medicago truncatula
Medtr8g062790 0.5kb downstream 0.5kb downstream 500   false chr8: 26266263-26266762 Medicago truncatula
Medtr8g062790 1.0kb upstream 1.0kb upstream 4780   true chr8: 26261483-26266262 Medicago truncatula
Medtr8g062790 1.0kb upstream 1.0kb upstream 1000   false chr8: 26261483-26262482 Medicago truncatula
Medtr8g062790 1.0kb downstream 1.0kb downstream 4780   true chr8: 26262483-26267262 Medicago truncatula
Medtr8g062790 1.0kb downstream 1.0kb downstream 1000   false chr8: 26266263-26267262 Medicago truncatula
Medtr8g062790 2.0kb upstream 2.0kb upstream 5780   true chr8: 26260483-26266262 Medicago truncatula
Medtr8g062790 2.0kb upstream 2.0kb upstream 2000   false chr8: 26260483-26262482 Medicago truncatula
Medtr8g062790 2.0kb downstream 2.0kb downstream 5780   true chr8: 26262483-26268262 Medicago truncatula
Medtr8g062790 2.0kb downstream 2.0kb downstream 2000   false chr8: 26266263-26268262 Medicago truncatula
Medtr8g062790 5.0kb upstream 5.0kb upstream 8780   true chr8: 26257483-26266262 Medicago truncatula
Medtr8g062790 5.0kb upstream 5.0kb upstream 5000   false chr8: 26257483-26262482 Medicago truncatula
Medtr8g062790 5.0kb downstream 5.0kb downstream 8780   true chr8: 26262483-26271262 Medicago truncatula
Medtr8g062790 5.0kb downstream 5.0kb downstream 5000   false chr8: 26266263-26271262 Medicago truncatula
Medtr8g062790 10.0kb upstream 10.0kb upstream 13780   true chr8: 26252483-26266262 Medicago truncatula
Medtr8g062790 10.0kb upstream 10.0kb upstream 10000   false chr8: 26252483-26262482 Medicago truncatula
Medtr8g062790 10.0kb downstream 10.0kb downstream 13780   true chr8: 26262483-26276262 Medicago truncatula
Medtr8g062790 10.0kb downstream 10.0kb downstream 10000   false chr8: 26266263-26276262 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303487 5265 Fabidae View MSA
124050601 5270 Rosid View MSA
123745487 5271 Pentapetalae View MSA
122795050 5272 Eudicot View MSA
122047186 5273 Angiosperm View MSA
121350602 5274 Embryophyte View MSA
123427442 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.052     Low Low
cufflinks 3.102       High
cufflinks 2.112        
cufflinks 0.222        
cufflinks 1.919        
cufflinks 0.097     Low Low
cufflinks 0.578        
cufflinks 2.05        
cufflinks 1.282        

0 Strain