Gene : Medtr8g062440 M. truncatula Mt4.0v1
Defline:  (1 of 21) 1.1.1.195 - Cinnamyl-alcohol dehydrogenase / CAD Description:  cinnamyl alcohol dehydrogenase
Genomic Order:  3080 Name:  ? Medtr8g062440
Secondary Identifier:  ? PAC:31074988
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-361 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g062440 0.5kb upstream 0.5kb upstream 6319   true chr8: 26099124-26105442 Medicago truncatula
Medtr8g062440 0.5kb upstream 0.5kb upstream 500   false chr8: 26099124-26099623 Medicago truncatula
Medtr8g062440 0.5kb downstream 0.5kb downstream 6319   true chr8: 26099624-26105942 Medicago truncatula
Medtr8g062440 0.5kb downstream 0.5kb downstream 500   false chr8: 26105443-26105942 Medicago truncatula
Medtr8g062440 1.0kb upstream 1.0kb upstream 6819   true chr8: 26098624-26105442 Medicago truncatula
Medtr8g062440 1.0kb upstream 1.0kb upstream 1000   false chr8: 26098624-26099623 Medicago truncatula
Medtr8g062440 1.0kb downstream 1.0kb downstream 6819   true chr8: 26099624-26106442 Medicago truncatula
Medtr8g062440 1.0kb downstream 1.0kb downstream 1000   false chr8: 26105443-26106442 Medicago truncatula
Medtr8g062440 2.0kb upstream 2.0kb upstream 7819   true chr8: 26097624-26105442 Medicago truncatula
Medtr8g062440 2.0kb upstream 2.0kb upstream 2000   false chr8: 26097624-26099623 Medicago truncatula
Medtr8g062440 2.0kb downstream 2.0kb downstream 7819   true chr8: 26099624-26107442 Medicago truncatula
Medtr8g062440 2.0kb downstream 2.0kb downstream 2000   false chr8: 26105443-26107442 Medicago truncatula
Medtr8g062440 5.0kb upstream 5.0kb upstream 10819   true chr8: 26094624-26105442 Medicago truncatula
Medtr8g062440 5.0kb upstream 5.0kb upstream 5000   false chr8: 26094624-26099623 Medicago truncatula
Medtr8g062440 5.0kb downstream 5.0kb downstream 10819   true chr8: 26099624-26110442 Medicago truncatula
Medtr8g062440 5.0kb downstream 5.0kb downstream 5000   false chr8: 26105443-26110442 Medicago truncatula
Medtr8g062440 10.0kb upstream 10.0kb upstream 15819   true chr8: 26089624-26105442 Medicago truncatula
Medtr8g062440 10.0kb upstream 10.0kb upstream 10000   false chr8: 26089624-26099623 Medicago truncatula
Medtr8g062440 10.0kb downstream 10.0kb downstream 15819   true chr8: 26099624-26115442 Medicago truncatula
Medtr8g062440 10.0kb downstream 10.0kb downstream 10000   false chr8: 26105443-26115442 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122269663 5265 Fabidae Singleton cluster - no MSA
124075409 5270 Rosid View MSA
123749871 5271 Pentapetalae View MSA
122798457 5272 Eudicot View MSA
122050735 5273 Angiosperm View MSA
121350507 5274 Embryophyte View MSA
123428289 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.569        
cufflinks 0.677        
cufflinks 0.889        
cufflinks 0.129       Low
cufflinks 0.793        
cufflinks 0.167       Low
cufflinks 0.697        
cufflinks 0.684        
cufflinks 0.636        

0 Strain