Gene : Medtr8g066180 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR10741:SF5 - TRANSLIN-ASSOCIATED PROTEIN X Description:  translin-associated factor X
Genomic Order:  3288 Name:  ? Medtr8g066180
Secondary Identifier:  ? PAC:31072808
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g066180 0.5kb upstream 0.5kb upstream 4545   true chr8: 27491749-27496293 Medicago truncatula
Medtr8g066180 0.5kb upstream 0.5kb upstream 500   false chr8: 27491749-27492248 Medicago truncatula
Medtr8g066180 0.5kb downstream 0.5kb downstream 4545   true chr8: 27492249-27496793 Medicago truncatula
Medtr8g066180 0.5kb downstream 0.5kb downstream 500   false chr8: 27496294-27496793 Medicago truncatula
Medtr8g066180 1.0kb upstream 1.0kb upstream 5045   true chr8: 27491249-27496293 Medicago truncatula
Medtr8g066180 1.0kb upstream 1.0kb upstream 1000   false chr8: 27491249-27492248 Medicago truncatula
Medtr8g066180 1.0kb downstream 1.0kb downstream 5045   true chr8: 27492249-27497293 Medicago truncatula
Medtr8g066180 1.0kb downstream 1.0kb downstream 1000   false chr8: 27496294-27497293 Medicago truncatula
Medtr8g066180 2.0kb upstream 2.0kb upstream 6045   true chr8: 27490249-27496293 Medicago truncatula
Medtr8g066180 2.0kb upstream 2.0kb upstream 2000   false chr8: 27490249-27492248 Medicago truncatula
Medtr8g066180 2.0kb downstream 2.0kb downstream 6045   true chr8: 27492249-27498293 Medicago truncatula
Medtr8g066180 2.0kb downstream 2.0kb downstream 2000   false chr8: 27496294-27498293 Medicago truncatula
Medtr8g066180 5.0kb upstream 5.0kb upstream 9045   true chr8: 27487249-27496293 Medicago truncatula
Medtr8g066180 5.0kb upstream 5.0kb upstream 5000   false chr8: 27487249-27492248 Medicago truncatula
Medtr8g066180 5.0kb downstream 5.0kb downstream 9045   true chr8: 27492249-27501293 Medicago truncatula
Medtr8g066180 5.0kb downstream 5.0kb downstream 5000   false chr8: 27496294-27501293 Medicago truncatula
Medtr8g066180 10.0kb upstream 10.0kb upstream 14045   true chr8: 27482249-27496293 Medicago truncatula
Medtr8g066180 10.0kb upstream 10.0kb upstream 10000   false chr8: 27482249-27492248 Medicago truncatula
Medtr8g066180 10.0kb downstream 10.0kb downstream 14045   true chr8: 27492249-27506293 Medicago truncatula
Medtr8g066180 10.0kb downstream 10.0kb downstream 10000   false chr8: 27496294-27506293 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303722 5265 Fabidae View MSA
124067948 5270 Rosid View MSA
123752005 5271 Pentapetalae View MSA
122788507 5272 Eudicot View MSA
122041771 5273 Angiosperm View MSA
121345786 5274 Embryophyte View MSA
123426526 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.674        
cufflinks 0.444        
cufflinks 0.697        
cufflinks 0.432        
cufflinks 1.673       High
cufflinks 0.03     Low Low
cufflinks 0.568        
cufflinks 0.649        
cufflinks 0.605        

0 Strain