Gene : Medtr8g064990 M. truncatula Mt4.0v1
Defline:  (1 of 3) 4.1.3.36 - 1,4-dihydroxy-2-naphthoyl-CoA synthase / o-succinylbenzoyl-CoA 1,4-dihydroxy-2-naphthoate-lyase (cyclizing) Description:  1,4-dihydroxy-2-naphthoyl-CoA synthase
Genomic Order:  3252 Name:  ? Medtr8g064990
Secondary Identifier:  ? PAC:31073568
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-5837 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g064990 0.5kb upstream 0.5kb upstream 3240   true chr8: 27290930-27294169 Medicago truncatula
Medtr8g064990 0.5kb upstream 0.5kb upstream 500   false chr8: 27293670-27294169 Medicago truncatula
Medtr8g064990 0.5kb downstream 0.5kb downstream 3240   true chr8: 27290430-27293669 Medicago truncatula
Medtr8g064990 0.5kb downstream 0.5kb downstream 500   false chr8: 27290430-27290929 Medicago truncatula
Medtr8g064990 1.0kb upstream 1.0kb upstream 3740   true chr8: 27290930-27294669 Medicago truncatula
Medtr8g064990 1.0kb upstream 1.0kb upstream 1000   false chr8: 27293670-27294669 Medicago truncatula
Medtr8g064990 1.0kb downstream 1.0kb downstream 3740   true chr8: 27289930-27293669 Medicago truncatula
Medtr8g064990 1.0kb downstream 1.0kb downstream 1000   false chr8: 27289930-27290929 Medicago truncatula
Medtr8g064990 2.0kb upstream 2.0kb upstream 4740   true chr8: 27290930-27295669 Medicago truncatula
Medtr8g064990 2.0kb upstream 2.0kb upstream 2000   false chr8: 27293670-27295669 Medicago truncatula
Medtr8g064990 2.0kb downstream 2.0kb downstream 4740   true chr8: 27288930-27293669 Medicago truncatula
Medtr8g064990 2.0kb downstream 2.0kb downstream 2000   false chr8: 27288930-27290929 Medicago truncatula
Medtr8g064990 5.0kb upstream 5.0kb upstream 7740   true chr8: 27290930-27298669 Medicago truncatula
Medtr8g064990 5.0kb upstream 5.0kb upstream 5000   false chr8: 27293670-27298669 Medicago truncatula
Medtr8g064990 5.0kb downstream 5.0kb downstream 7740   true chr8: 27285930-27293669 Medicago truncatula
Medtr8g064990 5.0kb downstream 5.0kb downstream 5000   false chr8: 27285930-27290929 Medicago truncatula
Medtr8g064990 10.0kb upstream 10.0kb upstream 12740   true chr8: 27290930-27303669 Medicago truncatula
Medtr8g064990 10.0kb upstream 10.0kb upstream 10000   false chr8: 27293670-27303669 Medicago truncatula
Medtr8g064990 10.0kb downstream 10.0kb downstream 12740   true chr8: 27280930-27293669 Medicago truncatula
Medtr8g064990 10.0kb downstream 10.0kb downstream 10000   false chr8: 27280930-27290929 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301826 5265 Fabidae View MSA
124066910 5270 Rosid View MSA
123738598 5271 Pentapetalae View MSA
122786230 5272 Eudicot View MSA
122043180 5273 Angiosperm View MSA
121346128 5274 Embryophyte View MSA
123423771 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.695        
cufflinks 5.077        
cufflinks 9.498       High
cufflinks 0.397        
cufflinks 5.723        
cufflinks 0.092     Low Low
cufflinks 0.182        
cufflinks 9.769     High High
cufflinks 0.228        

0 Strain