Gene : Medtr8g065030 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR31375:SF29 - PECTIN LYASE-LIKE PROTEIN-RELATED Description:  pectin lyase superfamily protein
Genomic Order:  3255 Name:  ? Medtr8g065030
Secondary Identifier:  ? PAC:31070754
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-1081 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g065030 0.5kb upstream 0.5kb upstream 4214   true chr8: 27310073-27314286 Medicago truncatula
Medtr8g065030 0.5kb upstream 0.5kb upstream 500   false chr8: 27313787-27314286 Medicago truncatula
Medtr8g065030 0.5kb downstream 0.5kb downstream 4214   true chr8: 27309573-27313786 Medicago truncatula
Medtr8g065030 0.5kb downstream 0.5kb downstream 500   false chr8: 27309573-27310072 Medicago truncatula
Medtr8g065030 1.0kb upstream 1.0kb upstream 4714   true chr8: 27310073-27314786 Medicago truncatula
Medtr8g065030 1.0kb upstream 1.0kb upstream 1000   false chr8: 27313787-27314786 Medicago truncatula
Medtr8g065030 1.0kb downstream 1.0kb downstream 4714   true chr8: 27309073-27313786 Medicago truncatula
Medtr8g065030 1.0kb downstream 1.0kb downstream 1000   false chr8: 27309073-27310072 Medicago truncatula
Medtr8g065030 2.0kb upstream 2.0kb upstream 5714   true chr8: 27310073-27315786 Medicago truncatula
Medtr8g065030 2.0kb upstream 2.0kb upstream 2000   false chr8: 27313787-27315786 Medicago truncatula
Medtr8g065030 2.0kb downstream 2.0kb downstream 5714   true chr8: 27308073-27313786 Medicago truncatula
Medtr8g065030 2.0kb downstream 2.0kb downstream 2000   false chr8: 27308073-27310072 Medicago truncatula
Medtr8g065030 5.0kb upstream 5.0kb upstream 8714   true chr8: 27310073-27318786 Medicago truncatula
Medtr8g065030 5.0kb upstream 5.0kb upstream 5000   false chr8: 27313787-27318786 Medicago truncatula
Medtr8g065030 5.0kb downstream 5.0kb downstream 8714   true chr8: 27305073-27313786 Medicago truncatula
Medtr8g065030 5.0kb downstream 5.0kb downstream 5000   false chr8: 27305073-27310072 Medicago truncatula
Medtr8g065030 10.0kb upstream 10.0kb upstream 13714   true chr8: 27310073-27323786 Medicago truncatula
Medtr8g065030 10.0kb upstream 10.0kb upstream 10000   false chr8: 27313787-27323786 Medicago truncatula
Medtr8g065030 10.0kb downstream 10.0kb downstream 13714   true chr8: 27300073-27313786 Medicago truncatula
Medtr8g065030 10.0kb downstream 10.0kb downstream 10000   false chr8: 27300073-27310072 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312299 5265 Fabidae View MSA
124062237 5270 Rosid View MSA
123747899 5271 Pentapetalae View MSA
122789338 5272 Eudicot View MSA
122047278 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.084       Low
cufflinks 3.092        
cufflinks 1.543        
cufflinks 0.335        
cufflinks 3.936       High
cufflinks 0.082     Low Low
cufflinks 1.003        
cufflinks 2.01        
cufflinks 1.666        

0 Strain