Gene : Medtr8g066780 M. truncatula Mt4.0v1
Defline:  (1 of 5) PTHR14155:SF94 - RING-H2 FINGER PROTEIN ATL33-RELATED Description:  anaphase-promoting complex subunit 11 RING-H2 finger protein
Genomic Order:  3332 Name:  ? Medtr8g066780
Secondary Identifier:  ? PAC:31072830
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g066780 0.5kb upstream 0.5kb upstream 2288   true chr8: 27770951-27773238 Medicago truncatula
Medtr8g066780 0.5kb upstream 0.5kb upstream 500   false chr8: 27772739-27773238 Medicago truncatula
Medtr8g066780 0.5kb downstream 0.5kb downstream 2288   true chr8: 27770451-27772738 Medicago truncatula
Medtr8g066780 0.5kb downstream 0.5kb downstream 500   false chr8: 27770451-27770950 Medicago truncatula
Medtr8g066780 1.0kb upstream 1.0kb upstream 2788   true chr8: 27770951-27773738 Medicago truncatula
Medtr8g066780 1.0kb upstream 1.0kb upstream 1000   false chr8: 27772739-27773738 Medicago truncatula
Medtr8g066780 1.0kb downstream 1.0kb downstream 2788   true chr8: 27769951-27772738 Medicago truncatula
Medtr8g066780 1.0kb downstream 1.0kb downstream 1000   false chr8: 27769951-27770950 Medicago truncatula
Medtr8g066780 2.0kb upstream 2.0kb upstream 3788   true chr8: 27770951-27774738 Medicago truncatula
Medtr8g066780 2.0kb upstream 2.0kb upstream 2000   false chr8: 27772739-27774738 Medicago truncatula
Medtr8g066780 2.0kb downstream 2.0kb downstream 3788   true chr8: 27768951-27772738 Medicago truncatula
Medtr8g066780 2.0kb downstream 2.0kb downstream 2000   false chr8: 27768951-27770950 Medicago truncatula
Medtr8g066780 5.0kb upstream 5.0kb upstream 6788   true chr8: 27770951-27777738 Medicago truncatula
Medtr8g066780 5.0kb upstream 5.0kb upstream 5000   false chr8: 27772739-27777738 Medicago truncatula
Medtr8g066780 5.0kb downstream 5.0kb downstream 6788   true chr8: 27765951-27772738 Medicago truncatula
Medtr8g066780 5.0kb downstream 5.0kb downstream 5000   false chr8: 27765951-27770950 Medicago truncatula
Medtr8g066780 10.0kb upstream 10.0kb upstream 11788   true chr8: 27770951-27782738 Medicago truncatula
Medtr8g066780 10.0kb upstream 10.0kb upstream 10000   false chr8: 27772739-27782738 Medicago truncatula
Medtr8g066780 10.0kb downstream 10.0kb downstream 11788   true chr8: 27760951-27772738 Medicago truncatula
Medtr8g066780 10.0kb downstream 10.0kb downstream 10000   false chr8: 27760951-27770950 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297931 5265 Fabidae View MSA
124072575 5270 Rosid View MSA
123753111 5271 Pentapetalae View MSA
122797850 5272 Eudicot View MSA
122051603 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121351603 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.264       Low
cufflinks 5.806       High
cufflinks 3.491        
cufflinks 0.644        
cufflinks 6.635       High
cufflinks 0.678        
cufflinks 0.745        
cufflinks 3.274        
cufflinks 1.033        

0 Strain