Gene : Medtr8g066600 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR15039:SF11 - DOLICHOL PHOSPHATE-MANNOSE BIOSYNTHESIS REGULATORY PROTEIN Description:  dolichol phosphate-mannose biosynthesis regulatory protein
Genomic Order:  3317 Name:  ? Medtr8g066600
Secondary Identifier:  ? PAC:31073665
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS Medicago truncatula pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g066600 0.5kb upstream 0.5kb upstream 3656   true chr8: 27683121-27686776 Medicago truncatula
Medtr8g066600 0.5kb upstream 0.5kb upstream 500   false chr8: 27683121-27683620 Medicago truncatula
Medtr8g066600 0.5kb downstream 0.5kb downstream 3656   true chr8: 27683621-27687276 Medicago truncatula
Medtr8g066600 0.5kb downstream 0.5kb downstream 500   false chr8: 27686777-27687276 Medicago truncatula
Medtr8g066600 1.0kb upstream 1.0kb upstream 4156   true chr8: 27682621-27686776 Medicago truncatula
Medtr8g066600 1.0kb upstream 1.0kb upstream 1000   false chr8: 27682621-27683620 Medicago truncatula
Medtr8g066600 1.0kb downstream 1.0kb downstream 4156   true chr8: 27683621-27687776 Medicago truncatula
Medtr8g066600 1.0kb downstream 1.0kb downstream 1000   false chr8: 27686777-27687776 Medicago truncatula
Medtr8g066600 2.0kb upstream 2.0kb upstream 5156   true chr8: 27681621-27686776 Medicago truncatula
Medtr8g066600 2.0kb upstream 2.0kb upstream 2000   false chr8: 27681621-27683620 Medicago truncatula
Medtr8g066600 2.0kb downstream 2.0kb downstream 5156   true chr8: 27683621-27688776 Medicago truncatula
Medtr8g066600 2.0kb downstream 2.0kb downstream 2000   false chr8: 27686777-27688776 Medicago truncatula
Medtr8g066600 5.0kb upstream 5.0kb upstream 8156   true chr8: 27678621-27686776 Medicago truncatula
Medtr8g066600 5.0kb upstream 5.0kb upstream 5000   false chr8: 27678621-27683620 Medicago truncatula
Medtr8g066600 5.0kb downstream 5.0kb downstream 8156   true chr8: 27683621-27691776 Medicago truncatula
Medtr8g066600 5.0kb downstream 5.0kb downstream 5000   false chr8: 27686777-27691776 Medicago truncatula
Medtr8g066600 10.0kb upstream 10.0kb upstream 13156   true chr8: 27673621-27686776 Medicago truncatula
Medtr8g066600 10.0kb upstream 10.0kb upstream 10000   false chr8: 27673621-27683620 Medicago truncatula
Medtr8g066600 10.0kb downstream 10.0kb downstream 13156   true chr8: 27683621-27696776 Medicago truncatula
Medtr8g066600 10.0kb downstream 10.0kb downstream 10000   false chr8: 27686777-27696776 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312722 5265 Fabidae View MSA
124071671 5270 Rosid View MSA
123741974 5271 Pentapetalae View MSA
122794154 5272 Eudicot View MSA
122048718 5273 Angiosperm View MSA
121349039 5274 Embryophyte View MSA
123381135 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.747        
cufflinks 0.687        
cufflinks 0.849        
cufflinks 1.829       High
cufflinks 0.73        
cufflinks 1.663       High
cufflinks 0.973        
cufflinks 0.633       Low
cufflinks 0.871        

0 Strain