Gene : Medtr8g039100 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR23086:SF29 - PHOSPHATIDYLINOSITOL 4-PHOSPHATE 5-KINASE 6 Description:  phosphatidylinositol-4-phosphate 5-kinase family protein
Genomic Order:  1912 Name:  ? Medtr8g039100
Secondary Identifier:  ? PAC:31073161
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-6351 Medicago truncatula pathologic  
Mtruncatula PWY-6352 Medicago truncatula pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g039100 0.5kb upstream 0.5kb upstream 5178   true chr8: 14517028-14522205 Medicago truncatula
Medtr8g039100 0.5kb upstream 0.5kb upstream 500   false chr8: 14521706-14522205 Medicago truncatula
Medtr8g039100 0.5kb downstream 0.5kb downstream 5178   true chr8: 14516528-14521705 Medicago truncatula
Medtr8g039100 0.5kb downstream 0.5kb downstream 500   false chr8: 14516528-14517027 Medicago truncatula
Medtr8g039100 1.0kb upstream 1.0kb upstream 5678   true chr8: 14517028-14522705 Medicago truncatula
Medtr8g039100 1.0kb upstream 1.0kb upstream 1000   false chr8: 14521706-14522705 Medicago truncatula
Medtr8g039100 1.0kb downstream 1.0kb downstream 5678   true chr8: 14516028-14521705 Medicago truncatula
Medtr8g039100 1.0kb downstream 1.0kb downstream 1000   false chr8: 14516028-14517027 Medicago truncatula
Medtr8g039100 2.0kb upstream 2.0kb upstream 6678   true chr8: 14517028-14523705 Medicago truncatula
Medtr8g039100 2.0kb upstream 2.0kb upstream 2000   false chr8: 14521706-14523705 Medicago truncatula
Medtr8g039100 2.0kb downstream 2.0kb downstream 6678   true chr8: 14515028-14521705 Medicago truncatula
Medtr8g039100 2.0kb downstream 2.0kb downstream 2000   false chr8: 14515028-14517027 Medicago truncatula
Medtr8g039100 5.0kb upstream 5.0kb upstream 9678   true chr8: 14517028-14526705 Medicago truncatula
Medtr8g039100 5.0kb upstream 5.0kb upstream 5000   false chr8: 14521706-14526705 Medicago truncatula
Medtr8g039100 5.0kb downstream 5.0kb downstream 9678   true chr8: 14512028-14521705 Medicago truncatula
Medtr8g039100 5.0kb downstream 5.0kb downstream 5000   false chr8: 14512028-14517027 Medicago truncatula
Medtr8g039100 10.0kb upstream 10.0kb upstream 14678   true chr8: 14517028-14531705 Medicago truncatula
Medtr8g039100 10.0kb upstream 10.0kb upstream 10000   false chr8: 14521706-14531705 Medicago truncatula
Medtr8g039100 10.0kb downstream 10.0kb downstream 14678   true chr8: 14507028-14521705 Medicago truncatula
Medtr8g039100 10.0kb downstream 10.0kb downstream 10000   false chr8: 14507028-14517027 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300708 5265 Fabidae View MSA
124073684 5270 Rosid View MSA
123747330 5271 Pentapetalae View MSA
122788169 5272 Eudicot View MSA
122047903 5273 Angiosperm View MSA
121310813 5274 Embryophyte View MSA
123428791 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.07        
cufflinks 0.271        
cufflinks 0.353        
cufflinks 0.016     Low Low
cufflinks 0.485       High
cufflinks 0.039     Low  
cufflinks 0.043     Low  
cufflinks 0.339        
cufflinks 0.03     Low  

0 Strain