Gene : Medtr8g040680 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR31696:SF4 - EXPRESSED PROTEIN Description:  DUF617 family protein
Genomic Order:  1998 Name:  ? Medtr8g040680
Secondary Identifier:  ? PAC:31074526
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g040680 0.5kb upstream 0.5kb upstream 1274   true chr8: 15148996-15150269 Medicago truncatula
Medtr8g040680 0.5kb upstream 0.5kb upstream 500   false chr8: 15148996-15149495 Medicago truncatula
Medtr8g040680 0.5kb downstream 0.5kb downstream 1274   true chr8: 15149496-15150769 Medicago truncatula
Medtr8g040680 0.5kb downstream 0.5kb downstream 500   false chr8: 15150270-15150769 Medicago truncatula
Medtr8g040680 1.0kb upstream 1.0kb upstream 1774   true chr8: 15148496-15150269 Medicago truncatula
Medtr8g040680 1.0kb upstream 1.0kb upstream 1000   false chr8: 15148496-15149495 Medicago truncatula
Medtr8g040680 1.0kb downstream 1.0kb downstream 1774   true chr8: 15149496-15151269 Medicago truncatula
Medtr8g040680 1.0kb downstream 1.0kb downstream 1000   false chr8: 15150270-15151269 Medicago truncatula
Medtr8g040680 2.0kb upstream 2.0kb upstream 2774   true chr8: 15147496-15150269 Medicago truncatula
Medtr8g040680 2.0kb upstream 2.0kb upstream 2000   false chr8: 15147496-15149495 Medicago truncatula
Medtr8g040680 2.0kb downstream 2.0kb downstream 2774   true chr8: 15149496-15152269 Medicago truncatula
Medtr8g040680 2.0kb downstream 2.0kb downstream 2000   false chr8: 15150270-15152269 Medicago truncatula
Medtr8g040680 5.0kb upstream 5.0kb upstream 5774   true chr8: 15144496-15150269 Medicago truncatula
Medtr8g040680 5.0kb upstream 5.0kb upstream 5000   false chr8: 15144496-15149495 Medicago truncatula
Medtr8g040680 5.0kb downstream 5.0kb downstream 5774   true chr8: 15149496-15155269 Medicago truncatula
Medtr8g040680 5.0kb downstream 5.0kb downstream 5000   false chr8: 15150270-15155269 Medicago truncatula
Medtr8g040680 10.0kb upstream 10.0kb upstream 10774   true chr8: 15139496-15150269 Medicago truncatula
Medtr8g040680 10.0kb upstream 10.0kb upstream 10000   false chr8: 15139496-15149495 Medicago truncatula
Medtr8g040680 10.0kb downstream 10.0kb downstream 10774   true chr8: 15149496-15160269 Medicago truncatula
Medtr8g040680 10.0kb downstream 10.0kb downstream 10000   false chr8: 15150270-15160269 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306691 5265 Fabidae View MSA
124073904 5270 Rosid View MSA
123746420 5271 Pentapetalae View MSA
122793418 5272 Eudicot View MSA
122044454 5273 Angiosperm View MSA
121349765 5274 Embryophyte View MSA
123381434 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.063     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.087       High
cufflinks 0.03     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.034     Low  
cufflinks 0.015     Low Low
cufflinks 0.047     Low  

0 Strain