Gene : Medtr8g040640 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR33334:SF2 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MQC3 Description:  hypothetical protein
Genomic Order:  1996 Name:  ? Medtr8g040640
Secondary Identifier:  ? PAC:31073677
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g040640 0.5kb upstream 0.5kb upstream 4773   true chr8: 15136847-15141619 Medicago truncatula
Medtr8g040640 0.5kb upstream 0.5kb upstream 500   false chr8: 15136847-15137346 Medicago truncatula
Medtr8g040640 0.5kb downstream 0.5kb downstream 4773   true chr8: 15137347-15142119 Medicago truncatula
Medtr8g040640 0.5kb downstream 0.5kb downstream 500   false chr8: 15141620-15142119 Medicago truncatula
Medtr8g040640 1.0kb upstream 1.0kb upstream 5273   true chr8: 15136347-15141619 Medicago truncatula
Medtr8g040640 1.0kb upstream 1.0kb upstream 1000   false chr8: 15136347-15137346 Medicago truncatula
Medtr8g040640 1.0kb downstream 1.0kb downstream 5273   true chr8: 15137347-15142619 Medicago truncatula
Medtr8g040640 1.0kb downstream 1.0kb downstream 1000   false chr8: 15141620-15142619 Medicago truncatula
Medtr8g040640 2.0kb upstream 2.0kb upstream 6273   true chr8: 15135347-15141619 Medicago truncatula
Medtr8g040640 2.0kb upstream 2.0kb upstream 2000   false chr8: 15135347-15137346 Medicago truncatula
Medtr8g040640 2.0kb downstream 2.0kb downstream 6273   true chr8: 15137347-15143619 Medicago truncatula
Medtr8g040640 2.0kb downstream 2.0kb downstream 2000   false chr8: 15141620-15143619 Medicago truncatula
Medtr8g040640 5.0kb upstream 5.0kb upstream 9273   true chr8: 15132347-15141619 Medicago truncatula
Medtr8g040640 5.0kb upstream 5.0kb upstream 5000   false chr8: 15132347-15137346 Medicago truncatula
Medtr8g040640 5.0kb downstream 5.0kb downstream 9273   true chr8: 15137347-15146619 Medicago truncatula
Medtr8g040640 5.0kb downstream 5.0kb downstream 5000   false chr8: 15141620-15146619 Medicago truncatula
Medtr8g040640 10.0kb upstream 10.0kb upstream 14273   true chr8: 15127347-15141619 Medicago truncatula
Medtr8g040640 10.0kb upstream 10.0kb upstream 10000   false chr8: 15127347-15137346 Medicago truncatula
Medtr8g040640 10.0kb downstream 10.0kb downstream 14273   true chr8: 15137347-15151619 Medicago truncatula
Medtr8g040640 10.0kb downstream 10.0kb downstream 10000   false chr8: 15141620-15151619 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312732 5265 Fabidae View MSA
124070153 5270 Rosid View MSA
123737898 5271 Pentapetalae View MSA
122796234 5272 Eudicot View MSA
122050625 5273 Angiosperm View MSA
121312034 5274 Embryophyte View MSA
123349247 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.89        
cufflinks 13.261     High High
cufflinks 3.234        
cufflinks 0.598       Low
cufflinks 6.965        
cufflinks 0.577       Low
cufflinks 2.629        
cufflinks 9.902     High  
cufflinks 5.087        

0 Strain