Gene : Medtr8g041420 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR10252//PTHR10252:SF40 - HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED Description:  negative cofactor 2 transcriptional co-repressor, putative
Genomic Order:  2038 Name:  ? Medtr8g041420
Secondary Identifier:  ? PAC:31075550
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g041420 0.5kb upstream 0.5kb upstream 4590   true chr8: 15590978-15595567 Medicago truncatula
Medtr8g041420 0.5kb upstream 0.5kb upstream 500   false chr8: 15595068-15595567 Medicago truncatula
Medtr8g041420 0.5kb downstream 0.5kb downstream 4590   true chr8: 15590478-15595067 Medicago truncatula
Medtr8g041420 0.5kb downstream 0.5kb downstream 500   false chr8: 15590478-15590977 Medicago truncatula
Medtr8g041420 1.0kb upstream 1.0kb upstream 5090   true chr8: 15590978-15596067 Medicago truncatula
Medtr8g041420 1.0kb upstream 1.0kb upstream 1000   false chr8: 15595068-15596067 Medicago truncatula
Medtr8g041420 1.0kb downstream 1.0kb downstream 5090   true chr8: 15589978-15595067 Medicago truncatula
Medtr8g041420 1.0kb downstream 1.0kb downstream 1000   false chr8: 15589978-15590977 Medicago truncatula
Medtr8g041420 2.0kb upstream 2.0kb upstream 6090   true chr8: 15590978-15597067 Medicago truncatula
Medtr8g041420 2.0kb upstream 2.0kb upstream 2000   false chr8: 15595068-15597067 Medicago truncatula
Medtr8g041420 2.0kb downstream 2.0kb downstream 6090   true chr8: 15588978-15595067 Medicago truncatula
Medtr8g041420 2.0kb downstream 2.0kb downstream 2000   false chr8: 15588978-15590977 Medicago truncatula
Medtr8g041420 5.0kb upstream 5.0kb upstream 9090   true chr8: 15590978-15600067 Medicago truncatula
Medtr8g041420 5.0kb upstream 5.0kb upstream 5000   false chr8: 15595068-15600067 Medicago truncatula
Medtr8g041420 5.0kb downstream 5.0kb downstream 9090   true chr8: 15585978-15595067 Medicago truncatula
Medtr8g041420 5.0kb downstream 5.0kb downstream 5000   false chr8: 15585978-15590977 Medicago truncatula
Medtr8g041420 10.0kb upstream 10.0kb upstream 14090   true chr8: 15590978-15605067 Medicago truncatula
Medtr8g041420 10.0kb upstream 10.0kb upstream 10000   false chr8: 15595068-15605067 Medicago truncatula
Medtr8g041420 10.0kb downstream 10.0kb downstream 14090   true chr8: 15580978-15595067 Medicago truncatula
Medtr8g041420 10.0kb downstream 10.0kb downstream 10000   false chr8: 15580978-15590977 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309450 5265 Fabidae View MSA
124069286 5270 Rosid View MSA
123742462 5271 Pentapetalae View MSA
122792661 5272 Eudicot View MSA
122049084 5273 Angiosperm View MSA
123429029 5275 Viridiplantae View MSA
121345521 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 24.55     High High
cufflinks 14.773     High  
cufflinks 15.276     High  
cufflinks 15.147     High  
cufflinks 14.905     High  
cufflinks 12.733     High  
cufflinks 22.073     High High
cufflinks 11.473     High Low
cufflinks 23.758     High High

0 Strain