Gene : Medtr8g045210 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR15238:SF3 - 50S RIBOSOMAL PROTEIN L33, CHLOROPLASTIC Description:  50S ribosomal protein L33
Genomic Order:  2248 Name:  ? Medtr8g045210
Secondary Identifier:  ? PAC:31073398
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2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PHOTOALL-PWY Medicago truncatula pathologic  
Mtruncatula PWY-101 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g045210 0.5kb upstream 0.5kb upstream 1342   true chr8: 17651167-17652508 Medicago truncatula
Medtr8g045210 0.5kb upstream 0.5kb upstream 500   false chr8: 17652009-17652508 Medicago truncatula
Medtr8g045210 0.5kb downstream 0.5kb downstream 1342   true chr8: 17650667-17652008 Medicago truncatula
Medtr8g045210 0.5kb downstream 0.5kb downstream 500   false chr8: 17650667-17651166 Medicago truncatula
Medtr8g045210 1.0kb upstream 1.0kb upstream 1842   true chr8: 17651167-17653008 Medicago truncatula
Medtr8g045210 1.0kb upstream 1.0kb upstream 1000   false chr8: 17652009-17653008 Medicago truncatula
Medtr8g045210 1.0kb downstream 1.0kb downstream 1842   true chr8: 17650167-17652008 Medicago truncatula
Medtr8g045210 1.0kb downstream 1.0kb downstream 1000   false chr8: 17650167-17651166 Medicago truncatula
Medtr8g045210 2.0kb upstream 2.0kb upstream 2842   true chr8: 17651167-17654008 Medicago truncatula
Medtr8g045210 2.0kb upstream 2.0kb upstream 2000   false chr8: 17652009-17654008 Medicago truncatula
Medtr8g045210 2.0kb downstream 2.0kb downstream 2842   true chr8: 17649167-17652008 Medicago truncatula
Medtr8g045210 2.0kb downstream 2.0kb downstream 2000   false chr8: 17649167-17651166 Medicago truncatula
Medtr8g045210 5.0kb upstream 5.0kb upstream 5842   true chr8: 17651167-17657008 Medicago truncatula
Medtr8g045210 5.0kb upstream 5.0kb upstream 5000   false chr8: 17652009-17657008 Medicago truncatula
Medtr8g045210 5.0kb downstream 5.0kb downstream 5842   true chr8: 17646167-17652008 Medicago truncatula
Medtr8g045210 5.0kb downstream 5.0kb downstream 5000   false chr8: 17646167-17651166 Medicago truncatula
Medtr8g045210 10.0kb upstream 10.0kb upstream 10842   true chr8: 17651167-17662008 Medicago truncatula
Medtr8g045210 10.0kb upstream 10.0kb upstream 10000   false chr8: 17652009-17662008 Medicago truncatula
Medtr8g045210 10.0kb downstream 10.0kb downstream 10842   true chr8: 17641167-17652008 Medicago truncatula
Medtr8g045210 10.0kb downstream 10.0kb downstream 10000   false chr8: 17641167-17651166 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121779911 5273 Angiosperm View MSA
122288157 5265 Fabidae View MSA
124040356 5270 Rosid View MSA
123744482 5271 Pentapetalae View MSA
122771105 5272 Eudicot View MSA
121051547 5274 Embryophyte View MSA
123091633 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.068        
cufflinks 0.945        
cufflinks 1.207       High
cufflinks 0.029     Low Low
cufflinks 0.683        
cufflinks 0.407        
cufflinks 0.055     Low  
cufflinks 0.955        
cufflinks 0.036     Low Low

0 Strain