Gene : Medtr8g043970 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR24349:SF88 - SERINE/THREONINE-PROTEIN KINASE CG17528 Description:  calmodulin-domain kinase CDPK protein
Genomic Order:  2169 Name:  ? Medtr8g043970
Secondary Identifier:  ? PAC:31069922
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g043970 0.5kb upstream 0.5kb upstream 5074   true chr8: 16814032-16819105 Medicago truncatula
Medtr8g043970 0.5kb upstream 0.5kb upstream 500   false chr8: 16814032-16814531 Medicago truncatula
Medtr8g043970 0.5kb downstream 0.5kb downstream 5074   true chr8: 16814532-16819605 Medicago truncatula
Medtr8g043970 0.5kb downstream 0.5kb downstream 500   false chr8: 16819106-16819605 Medicago truncatula
Medtr8g043970 1.0kb upstream 1.0kb upstream 5574   true chr8: 16813532-16819105 Medicago truncatula
Medtr8g043970 1.0kb upstream 1.0kb upstream 1000   false chr8: 16813532-16814531 Medicago truncatula
Medtr8g043970 1.0kb downstream 1.0kb downstream 5574   true chr8: 16814532-16820105 Medicago truncatula
Medtr8g043970 1.0kb downstream 1.0kb downstream 1000   false chr8: 16819106-16820105 Medicago truncatula
Medtr8g043970 2.0kb upstream 2.0kb upstream 6574   true chr8: 16812532-16819105 Medicago truncatula
Medtr8g043970 2.0kb upstream 2.0kb upstream 2000   false chr8: 16812532-16814531 Medicago truncatula
Medtr8g043970 2.0kb downstream 2.0kb downstream 6574   true chr8: 16814532-16821105 Medicago truncatula
Medtr8g043970 2.0kb downstream 2.0kb downstream 2000   false chr8: 16819106-16821105 Medicago truncatula
Medtr8g043970 5.0kb upstream 5.0kb upstream 9574   true chr8: 16809532-16819105 Medicago truncatula
Medtr8g043970 5.0kb upstream 5.0kb upstream 5000   false chr8: 16809532-16814531 Medicago truncatula
Medtr8g043970 5.0kb downstream 5.0kb downstream 9574   true chr8: 16814532-16824105 Medicago truncatula
Medtr8g043970 5.0kb downstream 5.0kb downstream 5000   false chr8: 16819106-16824105 Medicago truncatula
Medtr8g043970 10.0kb upstream 10.0kb upstream 14574   true chr8: 16804532-16819105 Medicago truncatula
Medtr8g043970 10.0kb upstream 10.0kb upstream 10000   false chr8: 16804532-16814531 Medicago truncatula
Medtr8g043970 10.0kb downstream 10.0kb downstream 14574   true chr8: 16814532-16829105 Medicago truncatula
Medtr8g043970 10.0kb downstream 10.0kb downstream 10000   false chr8: 16819106-16829105 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312150 5265 Fabidae View MSA
124070469 5270 Rosid View MSA
123742264 5271 Pentapetalae View MSA
122795447 5272 Eudicot View MSA
122049128 5273 Angiosperm View MSA
121348510 5274 Embryophyte View MSA
123380889 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.367     High High
cufflinks 0.063     Low  
cufflinks 0.071     Low  
cufflinks 2.18        
cufflinks 0.029     Low Low
cufflinks 3.132        
cufflinks 4.777        
cufflinks 0.028     Low Low
cufflinks 4.458        

0 Strain