Gene : Medtr8g043450 M. truncatula Mt4.0v1
Defline:  (1 of 2) KOG4032 - Uncharacterized conserved protein Description:  Pre-rRNA-processing protein TSR2, motif protein
Genomic Order:  2155 Name:  ? Medtr8g043450
Secondary Identifier:  ? PAC:31073612
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g043450 0.5kb upstream 0.5kb upstream 3668   true chr8: 16677438-16681105 Medicago truncatula
Medtr8g043450 0.5kb upstream 0.5kb upstream 500   false chr8: 16680606-16681105 Medicago truncatula
Medtr8g043450 0.5kb downstream 0.5kb downstream 3668   true chr8: 16676938-16680605 Medicago truncatula
Medtr8g043450 0.5kb downstream 0.5kb downstream 500   false chr8: 16676938-16677437 Medicago truncatula
Medtr8g043450 1.0kb upstream 1.0kb upstream 4168   true chr8: 16677438-16681605 Medicago truncatula
Medtr8g043450 1.0kb upstream 1.0kb upstream 1000   false chr8: 16680606-16681605 Medicago truncatula
Medtr8g043450 1.0kb downstream 1.0kb downstream 4168   true chr8: 16676438-16680605 Medicago truncatula
Medtr8g043450 1.0kb downstream 1.0kb downstream 1000   false chr8: 16676438-16677437 Medicago truncatula
Medtr8g043450 2.0kb upstream 2.0kb upstream 5168   true chr8: 16677438-16682605 Medicago truncatula
Medtr8g043450 2.0kb upstream 2.0kb upstream 2000   false chr8: 16680606-16682605 Medicago truncatula
Medtr8g043450 2.0kb downstream 2.0kb downstream 5168   true chr8: 16675438-16680605 Medicago truncatula
Medtr8g043450 2.0kb downstream 2.0kb downstream 2000   false chr8: 16675438-16677437 Medicago truncatula
Medtr8g043450 5.0kb upstream 5.0kb upstream 8168   true chr8: 16677438-16685605 Medicago truncatula
Medtr8g043450 5.0kb upstream 5.0kb upstream 5000   false chr8: 16680606-16685605 Medicago truncatula
Medtr8g043450 5.0kb downstream 5.0kb downstream 8168   true chr8: 16672438-16680605 Medicago truncatula
Medtr8g043450 5.0kb downstream 5.0kb downstream 5000   false chr8: 16672438-16677437 Medicago truncatula
Medtr8g043450 10.0kb upstream 10.0kb upstream 13168   true chr8: 16677438-16690605 Medicago truncatula
Medtr8g043450 10.0kb upstream 10.0kb upstream 10000   false chr8: 16680606-16690605 Medicago truncatula
Medtr8g043450 10.0kb downstream 10.0kb downstream 13168   true chr8: 16667438-16680605 Medicago truncatula
Medtr8g043450 10.0kb downstream 10.0kb downstream 10000   false chr8: 16667438-16677437 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303762 5265 Fabidae View MSA
124050746 5270 Rosid View MSA
123739382 5271 Pentapetalae View MSA
122787946 5272 Eudicot View MSA
122047443 5273 Angiosperm View MSA
121347527 5274 Embryophyte View MSA
123424114 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.803        
cufflinks 4.186        
cufflinks 5.121        
cufflinks 1.775        
cufflinks 7.802       High
cufflinks 0.474       Low
cufflinks 3.234        
cufflinks 4.815        
cufflinks 3.878        

0 Strain