Gene : Medtr8g046180 M. truncatula Mt4.0v1
Defline:  (1 of 2) PF12049 - Protein of unknown function (DUF3531) (DUF3531) Description:  oxidoreductase/transition metal ion-binding protein
Genomic Order:  2299 Name:  ? Medtr8g046180
Secondary Identifier:  ? PAC:31072691
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g046180 0.5kb upstream 0.5kb upstream 7080   true chr8: 18067900-18074979 Medicago truncatula
Medtr8g046180 0.5kb upstream 0.5kb upstream 500   false chr8: 18067900-18068399 Medicago truncatula
Medtr8g046180 0.5kb downstream 0.5kb downstream 7080   true chr8: 18068400-18075479 Medicago truncatula
Medtr8g046180 0.5kb downstream 0.5kb downstream 500   false chr8: 18074980-18075479 Medicago truncatula
Medtr8g046180 1.0kb upstream 1.0kb upstream 7580   true chr8: 18067400-18074979 Medicago truncatula
Medtr8g046180 1.0kb upstream 1.0kb upstream 1000   false chr8: 18067400-18068399 Medicago truncatula
Medtr8g046180 1.0kb downstream 1.0kb downstream 7580   true chr8: 18068400-18075979 Medicago truncatula
Medtr8g046180 1.0kb downstream 1.0kb downstream 1000   false chr8: 18074980-18075979 Medicago truncatula
Medtr8g046180 2.0kb upstream 2.0kb upstream 8580   true chr8: 18066400-18074979 Medicago truncatula
Medtr8g046180 2.0kb upstream 2.0kb upstream 2000   false chr8: 18066400-18068399 Medicago truncatula
Medtr8g046180 2.0kb downstream 2.0kb downstream 8580   true chr8: 18068400-18076979 Medicago truncatula
Medtr8g046180 2.0kb downstream 2.0kb downstream 2000   false chr8: 18074980-18076979 Medicago truncatula
Medtr8g046180 5.0kb upstream 5.0kb upstream 11580   true chr8: 18063400-18074979 Medicago truncatula
Medtr8g046180 5.0kb upstream 5.0kb upstream 5000   false chr8: 18063400-18068399 Medicago truncatula
Medtr8g046180 5.0kb downstream 5.0kb downstream 11580   true chr8: 18068400-18079979 Medicago truncatula
Medtr8g046180 5.0kb downstream 5.0kb downstream 5000   false chr8: 18074980-18079979 Medicago truncatula
Medtr8g046180 10.0kb upstream 10.0kb upstream 16580   true chr8: 18058400-18074979 Medicago truncatula
Medtr8g046180 10.0kb upstream 10.0kb upstream 10000   false chr8: 18058400-18068399 Medicago truncatula
Medtr8g046180 10.0kb downstream 10.0kb downstream 16580   true chr8: 18068400-18084979 Medicago truncatula
Medtr8g046180 10.0kb downstream 10.0kb downstream 10000   false chr8: 18074980-18084979 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310619 5265 Fabidae View MSA
124064322 5270 Rosid View MSA
123739536 5271 Pentapetalae View MSA
122788099 5272 Eudicot View MSA
122041579 5273 Angiosperm View MSA
121352142 5274 Embryophyte View MSA
123426298 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.907        
cufflinks 1.458        
cufflinks 1.369        
cufflinks 0.256       Low
cufflinks 1.343        
cufflinks 0.512        
cufflinks 0.698        
cufflinks 1.357        
cufflinks 0.271       Low

0 Strain