Gene : Medtr8g046300 M. truncatula Mt4.0v1
Defline:  (1 of 2) KOG3083 - Prohibitin Description:  prohibitin complex protein
Genomic Order:  2310 Name:  ? Medtr8g046300
Secondary Identifier:  ? PAC:31071445
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g046300 0.5kb upstream 0.5kb upstream 4319   true chr8: 18132541-18136859 Medicago truncatula
Medtr8g046300 0.5kb upstream 0.5kb upstream 500   false chr8: 18132541-18133040 Medicago truncatula
Medtr8g046300 0.5kb downstream 0.5kb downstream 4319   true chr8: 18133041-18137359 Medicago truncatula
Medtr8g046300 0.5kb downstream 0.5kb downstream 500   false chr8: 18136860-18137359 Medicago truncatula
Medtr8g046300 1.0kb upstream 1.0kb upstream 4819   true chr8: 18132041-18136859 Medicago truncatula
Medtr8g046300 1.0kb upstream 1.0kb upstream 1000   false chr8: 18132041-18133040 Medicago truncatula
Medtr8g046300 1.0kb downstream 1.0kb downstream 4819   true chr8: 18133041-18137859 Medicago truncatula
Medtr8g046300 1.0kb downstream 1.0kb downstream 1000   false chr8: 18136860-18137859 Medicago truncatula
Medtr8g046300 2.0kb upstream 2.0kb upstream 5819   true chr8: 18131041-18136859 Medicago truncatula
Medtr8g046300 2.0kb upstream 2.0kb upstream 2000   false chr8: 18131041-18133040 Medicago truncatula
Medtr8g046300 2.0kb downstream 2.0kb downstream 5819   true chr8: 18133041-18138859 Medicago truncatula
Medtr8g046300 2.0kb downstream 2.0kb downstream 2000   false chr8: 18136860-18138859 Medicago truncatula
Medtr8g046300 5.0kb upstream 5.0kb upstream 8819   true chr8: 18128041-18136859 Medicago truncatula
Medtr8g046300 5.0kb upstream 5.0kb upstream 5000   false chr8: 18128041-18133040 Medicago truncatula
Medtr8g046300 5.0kb downstream 5.0kb downstream 8819   true chr8: 18133041-18141859 Medicago truncatula
Medtr8g046300 5.0kb downstream 5.0kb downstream 5000   false chr8: 18136860-18141859 Medicago truncatula
Medtr8g046300 10.0kb upstream 10.0kb upstream 13819   true chr8: 18123041-18136859 Medicago truncatula
Medtr8g046300 10.0kb upstream 10.0kb upstream 10000   false chr8: 18123041-18133040 Medicago truncatula
Medtr8g046300 10.0kb downstream 10.0kb downstream 13819   true chr8: 18133041-18146859 Medicago truncatula
Medtr8g046300 10.0kb downstream 10.0kb downstream 10000   false chr8: 18136860-18146859 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311051 5265 Fabidae View MSA
124063622 5270 Rosid View MSA
123737783 5271 Pentapetalae View MSA
122796459 5272 Eudicot View MSA
122046711 5273 Angiosperm View MSA
121346125 5274 Embryophyte View MSA
123427118 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.094       Low
cufflinks 0.41        
cufflinks 0.378        
cufflinks 0.353        
cufflinks 1.785       High
cufflinks 0.163       Low
cufflinks 0.461        
cufflinks 0.487        
cufflinks 1.137       High

0 Strain