Gene : Medtr8g054450 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR11545:SF7 - 50S RIBOSOMAL PROTEIN L13, CHLOROPLASTIC Description:  50S ribosomal protein L13
Genomic Order:  2479 Name:  ? Medtr8g054450
Secondary Identifier:  ? PAC:31071119
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g054450 0.5kb upstream 0.5kb upstream 4779   true chr8: 19793230-19798008 Medicago truncatula
Medtr8g054450 0.5kb upstream 0.5kb upstream 500   false chr8: 19793230-19793729 Medicago truncatula
Medtr8g054450 0.5kb downstream 0.5kb downstream 4779   true chr8: 19793730-19798508 Medicago truncatula
Medtr8g054450 0.5kb downstream 0.5kb downstream 500   false chr8: 19798009-19798508 Medicago truncatula
Medtr8g054450 1.0kb upstream 1.0kb upstream 5279   true chr8: 19792730-19798008 Medicago truncatula
Medtr8g054450 1.0kb upstream 1.0kb upstream 1000   false chr8: 19792730-19793729 Medicago truncatula
Medtr8g054450 1.0kb downstream 1.0kb downstream 5279   true chr8: 19793730-19799008 Medicago truncatula
Medtr8g054450 1.0kb downstream 1.0kb downstream 1000   false chr8: 19798009-19799008 Medicago truncatula
Medtr8g054450 2.0kb upstream 2.0kb upstream 6279   true chr8: 19791730-19798008 Medicago truncatula
Medtr8g054450 2.0kb upstream 2.0kb upstream 2000   false chr8: 19791730-19793729 Medicago truncatula
Medtr8g054450 2.0kb downstream 2.0kb downstream 6279   true chr8: 19793730-19800008 Medicago truncatula
Medtr8g054450 2.0kb downstream 2.0kb downstream 2000   false chr8: 19798009-19800008 Medicago truncatula
Medtr8g054450 5.0kb upstream 5.0kb upstream 9279   true chr8: 19788730-19798008 Medicago truncatula
Medtr8g054450 5.0kb upstream 5.0kb upstream 5000   false chr8: 19788730-19793729 Medicago truncatula
Medtr8g054450 5.0kb downstream 5.0kb downstream 9279   true chr8: 19793730-19803008 Medicago truncatula
Medtr8g054450 5.0kb downstream 5.0kb downstream 5000   false chr8: 19798009-19803008 Medicago truncatula
Medtr8g054450 10.0kb upstream 10.0kb upstream 14279   true chr8: 19783730-19798008 Medicago truncatula
Medtr8g054450 10.0kb upstream 10.0kb upstream 10000   false chr8: 19783730-19793729 Medicago truncatula
Medtr8g054450 10.0kb downstream 10.0kb downstream 14279   true chr8: 19793730-19808008 Medicago truncatula
Medtr8g054450 10.0kb downstream 10.0kb downstream 10000   false chr8: 19798009-19808008 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303125 5265 Fabidae View MSA
124064929 5270 Rosid View MSA
123742775 5271 Pentapetalae View MSA
122786889 5272 Eudicot View MSA
122046180 5273 Angiosperm View MSA
121346558 5274 Embryophyte View MSA
123428776 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.444        
cufflinks 43.958     High High
cufflinks 29.118     High  
cufflinks 2.792        
cufflinks 42.703     High High
cufflinks 1.405        
cufflinks 1.309        
cufflinks 44.281     High High
cufflinks 1.772        

0 Strain