Gene : Medtr8g099030 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR11972//PTHR11972:SF81 - NADPH OXIDASE Description:  respiratory burst oxidase-like protein
Genomic Order:  5232 Name:  ? Medtr8g099030
Secondary Identifier:  ? PAC:31075112
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g099030 0.5kb upstream 0.5kb upstream 10828   true chr8: 41549432-41560259 Medicago truncatula
Medtr8g099030 0.5kb upstream 0.5kb upstream 500   false chr8: 41549432-41549931 Medicago truncatula
Medtr8g099030 0.5kb downstream 0.5kb downstream 10828   true chr8: 41549932-41560759 Medicago truncatula
Medtr8g099030 0.5kb downstream 0.5kb downstream 500   false chr8: 41560260-41560759 Medicago truncatula
Medtr8g099030 1.0kb upstream 1.0kb upstream 11328   true chr8: 41548932-41560259 Medicago truncatula
Medtr8g099030 1.0kb upstream 1.0kb upstream 1000   false chr8: 41548932-41549931 Medicago truncatula
Medtr8g099030 1.0kb downstream 1.0kb downstream 11328   true chr8: 41549932-41561259 Medicago truncatula
Medtr8g099030 1.0kb downstream 1.0kb downstream 1000   false chr8: 41560260-41561259 Medicago truncatula
Medtr8g099030 2.0kb upstream 2.0kb upstream 12328   true chr8: 41547932-41560259 Medicago truncatula
Medtr8g099030 2.0kb upstream 2.0kb upstream 2000   false chr8: 41547932-41549931 Medicago truncatula
Medtr8g099030 2.0kb downstream 2.0kb downstream 12328   true chr8: 41549932-41562259 Medicago truncatula
Medtr8g099030 2.0kb downstream 2.0kb downstream 2000   false chr8: 41560260-41562259 Medicago truncatula
Medtr8g099030 5.0kb upstream 5.0kb upstream 15328   true chr8: 41544932-41560259 Medicago truncatula
Medtr8g099030 5.0kb upstream 5.0kb upstream 5000   false chr8: 41544932-41549931 Medicago truncatula
Medtr8g099030 5.0kb downstream 5.0kb downstream 15328   true chr8: 41549932-41565259 Medicago truncatula
Medtr8g099030 5.0kb downstream 5.0kb downstream 5000   false chr8: 41560260-41565259 Medicago truncatula
Medtr8g099030 10.0kb upstream 10.0kb upstream 20328   true chr8: 41539932-41560259 Medicago truncatula
Medtr8g099030 10.0kb upstream 10.0kb upstream 10000   false chr8: 41539932-41549931 Medicago truncatula
Medtr8g099030 10.0kb downstream 10.0kb downstream 20328   true chr8: 41549932-41570259 Medicago truncatula
Medtr8g099030 10.0kb downstream 10.0kb downstream 10000   false chr8: 41560260-41570259 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306520 5265 Fabidae View MSA
124068511 5270 Rosid View MSA
123750784 5271 Pentapetalae View MSA
122788657 5272 Eudicot View MSA
122049816 5273 Angiosperm View MSA
121350202 5274 Embryophyte View MSA
123427915 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.224       High
cufflinks 0.454        
cufflinks 0.31        
cufflinks 0.108       Low
cufflinks 0.689        
cufflinks 0.341        
cufflinks 1.168        
cufflinks 0.257        
cufflinks 1.191        

0 Strain