Gene : Medtr8g099525 M. truncatula Mt4.0v1
Description:  PPR superfamily protein Genomic Order:  5302
Name:  ? Medtr8g099525 Secondary Identifier:  ? PAC:31076541
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g099525 0.5kb upstream 0.5kb upstream 6637   true chr8: 42013988-42020624 Medicago truncatula
Medtr8g099525 0.5kb upstream 0.5kb upstream 500   false chr8: 42013988-42014487 Medicago truncatula
Medtr8g099525 0.5kb downstream 0.5kb downstream 6637   true chr8: 42014488-42021124 Medicago truncatula
Medtr8g099525 0.5kb downstream 0.5kb downstream 500   false chr8: 42020625-42021124 Medicago truncatula
Medtr8g099525 1.0kb upstream 1.0kb upstream 7137   true chr8: 42013488-42020624 Medicago truncatula
Medtr8g099525 1.0kb upstream 1.0kb upstream 1000   false chr8: 42013488-42014487 Medicago truncatula
Medtr8g099525 1.0kb downstream 1.0kb downstream 7137   true chr8: 42014488-42021624 Medicago truncatula
Medtr8g099525 1.0kb downstream 1.0kb downstream 1000   false chr8: 42020625-42021624 Medicago truncatula
Medtr8g099525 2.0kb upstream 2.0kb upstream 8137   true chr8: 42012488-42020624 Medicago truncatula
Medtr8g099525 2.0kb upstream 2.0kb upstream 2000   false chr8: 42012488-42014487 Medicago truncatula
Medtr8g099525 2.0kb downstream 2.0kb downstream 8137   true chr8: 42014488-42022624 Medicago truncatula
Medtr8g099525 2.0kb downstream 2.0kb downstream 2000   false chr8: 42020625-42022624 Medicago truncatula
Medtr8g099525 5.0kb upstream 5.0kb upstream 11137   true chr8: 42009488-42020624 Medicago truncatula
Medtr8g099525 5.0kb upstream 5.0kb upstream 5000   false chr8: 42009488-42014487 Medicago truncatula
Medtr8g099525 5.0kb downstream 5.0kb downstream 11137   true chr8: 42014488-42025624 Medicago truncatula
Medtr8g099525 5.0kb downstream 5.0kb downstream 5000   false chr8: 42020625-42025624 Medicago truncatula
Medtr8g099525 10.0kb upstream 10.0kb upstream 16137   true chr8: 42004488-42020624 Medicago truncatula
Medtr8g099525 10.0kb upstream 10.0kb upstream 10000   false chr8: 42004488-42014487 Medicago truncatula
Medtr8g099525 10.0kb downstream 10.0kb downstream 16137   true chr8: 42014488-42030624 Medicago truncatula
Medtr8g099525 10.0kb downstream 10.0kb downstream 10000   false chr8: 42020625-42030624 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309995 5265 Fabidae View MSA
124066809 5270 Rosid View MSA
123736501 5271 Pentapetalae View MSA
122790212 5272 Eudicot View MSA
122042268 5273 Angiosperm View MSA
121347908 5274 Embryophyte View MSA
123425074 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.256        
cufflinks 6.062        
cufflinks 5.333        
cufflinks 0.085       Low
cufflinks 9.817       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.118        
cufflinks 5.881        
cufflinks 0.141        

0 Strain