Gene : Medtr8g099880 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR12565:SF90 - TRANSCRIPTION FACTOR BHLH137 Description:  basic helix loop helix protein BHLH8
Genomic Order:  5063 Name:  ? Medtr8g099880
Secondary Identifier:  ? PAC:31071106
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g099880 0.5kb upstream 0.5kb upstream 3660   true chr8: 40310288-40313947 Medicago truncatula
Medtr8g099880 0.5kb upstream 0.5kb upstream 500   false chr8: 40310288-40310787 Medicago truncatula
Medtr8g099880 0.5kb downstream 0.5kb downstream 3660   true chr8: 40310788-40314447 Medicago truncatula
Medtr8g099880 0.5kb downstream 0.5kb downstream 500   false chr8: 40313948-40314447 Medicago truncatula
Medtr8g099880 1.0kb upstream 1.0kb upstream 4160   true chr8: 40309788-40313947 Medicago truncatula
Medtr8g099880 1.0kb upstream 1.0kb upstream 1000   false chr8: 40309788-40310787 Medicago truncatula
Medtr8g099880 1.0kb downstream 1.0kb downstream 4160   true chr8: 40310788-40314947 Medicago truncatula
Medtr8g099880 1.0kb downstream 1.0kb downstream 1000   false chr8: 40313948-40314947 Medicago truncatula
Medtr8g099880 2.0kb upstream 2.0kb upstream 5160   true chr8: 40308788-40313947 Medicago truncatula
Medtr8g099880 2.0kb upstream 2.0kb upstream 2000   false chr8: 40308788-40310787 Medicago truncatula
Medtr8g099880 2.0kb downstream 2.0kb downstream 5160   true chr8: 40310788-40315947 Medicago truncatula
Medtr8g099880 2.0kb downstream 2.0kb downstream 2000   false chr8: 40313948-40315947 Medicago truncatula
Medtr8g099880 5.0kb upstream 5.0kb upstream 8160   true chr8: 40305788-40313947 Medicago truncatula
Medtr8g099880 5.0kb upstream 5.0kb upstream 5000   false chr8: 40305788-40310787 Medicago truncatula
Medtr8g099880 5.0kb downstream 5.0kb downstream 8160   true chr8: 40310788-40318947 Medicago truncatula
Medtr8g099880 5.0kb downstream 5.0kb downstream 5000   false chr8: 40313948-40318947 Medicago truncatula
Medtr8g099880 10.0kb upstream 10.0kb upstream 13160   true chr8: 40300788-40313947 Medicago truncatula
Medtr8g099880 10.0kb upstream 10.0kb upstream 10000   false chr8: 40300788-40310787 Medicago truncatula
Medtr8g099880 10.0kb downstream 10.0kb downstream 13160   true chr8: 40310788-40323947 Medicago truncatula
Medtr8g099880 10.0kb downstream 10.0kb downstream 10000   false chr8: 40313948-40323947 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311083 5265 Fabidae View MSA
124068210 5270 Rosid View MSA
123746913 5271 Pentapetalae View MSA
122796649 5272 Eudicot View MSA
122049789 5273 Angiosperm View MSA
121351233 5274 Embryophyte View MSA
123382070 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.007     Low Low
cufflinks 2.25        
cufflinks 2.637        
cufflinks 0.023     Low Low
cufflinks 2.486        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.105        
cufflinks 2.246        
cufflinks 0.067     Low  

0 Strain