Gene : Medtr8g100120 M. truncatula Mt4.0v1
Defline:  (1 of 2) 2.1.1.11 - Magnesium protoporphyrin IX methyltransferase / S-adenosylmethioninemagnesium protoporphyrin methyltransferase Description:  Mg-protoporphyrin IX methyltransferase
Genomic Order:  5047 Name:  ? Medtr8g100120
Secondary Identifier:  ? PAC:31074078
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula CHLOROPHYLL-SYN Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g100120 0.5kb upstream 0.5kb upstream 2800   true chr8: 40181722-40184521 Medicago truncatula
Medtr8g100120 0.5kb upstream 0.5kb upstream 500   false chr8: 40184022-40184521 Medicago truncatula
Medtr8g100120 0.5kb downstream 0.5kb downstream 2800   true chr8: 40181222-40184021 Medicago truncatula
Medtr8g100120 0.5kb downstream 0.5kb downstream 500   false chr8: 40181222-40181721 Medicago truncatula
Medtr8g100120 1.0kb upstream 1.0kb upstream 3300   true chr8: 40181722-40185021 Medicago truncatula
Medtr8g100120 1.0kb upstream 1.0kb upstream 1000   false chr8: 40184022-40185021 Medicago truncatula
Medtr8g100120 1.0kb downstream 1.0kb downstream 3300   true chr8: 40180722-40184021 Medicago truncatula
Medtr8g100120 1.0kb downstream 1.0kb downstream 1000   false chr8: 40180722-40181721 Medicago truncatula
Medtr8g100120 2.0kb upstream 2.0kb upstream 4300   true chr8: 40181722-40186021 Medicago truncatula
Medtr8g100120 2.0kb upstream 2.0kb upstream 2000   false chr8: 40184022-40186021 Medicago truncatula
Medtr8g100120 2.0kb downstream 2.0kb downstream 4300   true chr8: 40179722-40184021 Medicago truncatula
Medtr8g100120 2.0kb downstream 2.0kb downstream 2000   false chr8: 40179722-40181721 Medicago truncatula
Medtr8g100120 5.0kb upstream 5.0kb upstream 7300   true chr8: 40181722-40189021 Medicago truncatula
Medtr8g100120 5.0kb upstream 5.0kb upstream 5000   false chr8: 40184022-40189021 Medicago truncatula
Medtr8g100120 5.0kb downstream 5.0kb downstream 7300   true chr8: 40176722-40184021 Medicago truncatula
Medtr8g100120 5.0kb downstream 5.0kb downstream 5000   false chr8: 40176722-40181721 Medicago truncatula
Medtr8g100120 10.0kb upstream 10.0kb upstream 12300   true chr8: 40181722-40194021 Medicago truncatula
Medtr8g100120 10.0kb upstream 10.0kb upstream 10000   false chr8: 40184022-40194021 Medicago truncatula
Medtr8g100120 10.0kb downstream 10.0kb downstream 12300   true chr8: 40171722-40184021 Medicago truncatula
Medtr8g100120 10.0kb downstream 10.0kb downstream 10000   false chr8: 40171722-40181721 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303274 5265 Fabidae View MSA
124063619 5270 Rosid View MSA
123739209 5271 Pentapetalae View MSA
122792870 5272 Eudicot View MSA
122043100 5273 Angiosperm View MSA
121345477 5274 Embryophyte View MSA
123424951 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.091       Low
cufflinks 49.04     High  
cufflinks 49.24     High  
cufflinks 0.807        
cufflinks 91.763     High High
cufflinks 0.106     Low Low
cufflinks 0.403        
cufflinks 60.028     High High
cufflinks 0.288        

0 Strain