Gene : Medtr8g101710 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR11034:SF23 - N-MYC DOWNREGULATED-LIKE 3 PROTEIN Description:  pollen-specific SF21-like protein
Genomic Order:  5393 Name:  ? Medtr8g101710
Secondary Identifier:  ? PAC:31069620
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g101710 0.5kb upstream 0.5kb upstream 4621   true chr8: 42762203-42766823 Medicago truncatula
Medtr8g101710 0.5kb upstream 0.5kb upstream 500   false chr8: 42762203-42762702 Medicago truncatula
Medtr8g101710 0.5kb downstream 0.5kb downstream 4621   true chr8: 42762703-42767323 Medicago truncatula
Medtr8g101710 0.5kb downstream 0.5kb downstream 500   false chr8: 42766824-42767323 Medicago truncatula
Medtr8g101710 1.0kb upstream 1.0kb upstream 5121   true chr8: 42761703-42766823 Medicago truncatula
Medtr8g101710 1.0kb upstream 1.0kb upstream 1000   false chr8: 42761703-42762702 Medicago truncatula
Medtr8g101710 1.0kb downstream 1.0kb downstream 5121   true chr8: 42762703-42767823 Medicago truncatula
Medtr8g101710 1.0kb downstream 1.0kb downstream 1000   false chr8: 42766824-42767823 Medicago truncatula
Medtr8g101710 2.0kb upstream 2.0kb upstream 6121   true chr8: 42760703-42766823 Medicago truncatula
Medtr8g101710 2.0kb upstream 2.0kb upstream 2000   false chr8: 42760703-42762702 Medicago truncatula
Medtr8g101710 2.0kb downstream 2.0kb downstream 6121   true chr8: 42762703-42768823 Medicago truncatula
Medtr8g101710 2.0kb downstream 2.0kb downstream 2000   false chr8: 42766824-42768823 Medicago truncatula
Medtr8g101710 5.0kb upstream 5.0kb upstream 9121   true chr8: 42757703-42766823 Medicago truncatula
Medtr8g101710 5.0kb upstream 5.0kb upstream 5000   false chr8: 42757703-42762702 Medicago truncatula
Medtr8g101710 5.0kb downstream 5.0kb downstream 9121   true chr8: 42762703-42771823 Medicago truncatula
Medtr8g101710 5.0kb downstream 5.0kb downstream 5000   false chr8: 42766824-42771823 Medicago truncatula
Medtr8g101710 10.0kb upstream 10.0kb upstream 14121   true chr8: 42752703-42766823 Medicago truncatula
Medtr8g101710 10.0kb upstream 10.0kb upstream 10000   false chr8: 42752703-42762702 Medicago truncatula
Medtr8g101710 10.0kb downstream 10.0kb downstream 14121   true chr8: 42762703-42776823 Medicago truncatula
Medtr8g101710 10.0kb downstream 10.0kb downstream 10000   false chr8: 42766824-42776823 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299101 5265 Fabidae View MSA
124071063 5270 Rosid View MSA
123743242 5271 Pentapetalae View MSA
122795895 5272 Eudicot View MSA
122051433 5273 Angiosperm View MSA
121349062 5274 Embryophyte View MSA
123381146 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.821        
cufflinks 1.499        
cufflinks 2.075        
cufflinks 1.582        
cufflinks 1.774        
cufflinks 0.741       Low
cufflinks 2.655       High
cufflinks 1.73        
cufflinks 2.785       High

0 Strain