Gene : Medtr8g101360 M. truncatula Mt4.0v1
Defline:  (1 of 13) PF02309//PF02362//PF06507 - AUX/IAA family (AUX_IAA) // B3 DNA binding domain (B3) // Auxin response factor (Auxin_resp) Description:  auxin response factor 2
Genomic Order:  5369 Name:  ? Medtr8g101360
Secondary Identifier:  ? PAC:31076069
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g101360 0.5kb upstream 0.5kb upstream 6478   true chr8: 42563540-42570017 Medicago truncatula
Medtr8g101360 0.5kb upstream 0.5kb upstream 500   false chr8: 42569518-42570017 Medicago truncatula
Medtr8g101360 0.5kb downstream 0.5kb downstream 6478   true chr8: 42563040-42569517 Medicago truncatula
Medtr8g101360 0.5kb downstream 0.5kb downstream 500   false chr8: 42563040-42563539 Medicago truncatula
Medtr8g101360 1.0kb upstream 1.0kb upstream 6978   true chr8: 42563540-42570517 Medicago truncatula
Medtr8g101360 1.0kb upstream 1.0kb upstream 1000   false chr8: 42569518-42570517 Medicago truncatula
Medtr8g101360 1.0kb downstream 1.0kb downstream 6978   true chr8: 42562540-42569517 Medicago truncatula
Medtr8g101360 1.0kb downstream 1.0kb downstream 1000   false chr8: 42562540-42563539 Medicago truncatula
Medtr8g101360 2.0kb upstream 2.0kb upstream 7978   true chr8: 42563540-42571517 Medicago truncatula
Medtr8g101360 2.0kb upstream 2.0kb upstream 2000   false chr8: 42569518-42571517 Medicago truncatula
Medtr8g101360 2.0kb downstream 2.0kb downstream 7978   true chr8: 42561540-42569517 Medicago truncatula
Medtr8g101360 2.0kb downstream 2.0kb downstream 2000   false chr8: 42561540-42563539 Medicago truncatula
Medtr8g101360 5.0kb upstream 5.0kb upstream 10978   true chr8: 42563540-42574517 Medicago truncatula
Medtr8g101360 5.0kb upstream 5.0kb upstream 5000   false chr8: 42569518-42574517 Medicago truncatula
Medtr8g101360 5.0kb downstream 5.0kb downstream 10978   true chr8: 42558540-42569517 Medicago truncatula
Medtr8g101360 5.0kb downstream 5.0kb downstream 5000   false chr8: 42558540-42563539 Medicago truncatula
Medtr8g101360 10.0kb upstream 10.0kb upstream 15978   true chr8: 42563540-42579517 Medicago truncatula
Medtr8g101360 10.0kb upstream 10.0kb upstream 10000   false chr8: 42569518-42579517 Medicago truncatula
Medtr8g101360 10.0kb downstream 10.0kb downstream 15978   true chr8: 42553540-42569517 Medicago truncatula
Medtr8g101360 10.0kb downstream 10.0kb downstream 10000   false chr8: 42553540-42563539 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309356 5265 Fabidae View MSA
124073682 5270 Rosid View MSA
123741284 5271 Pentapetalae View MSA
122791344 5272 Eudicot View MSA
122042731 5273 Angiosperm View MSA
121351367 5274 Embryophyte View MSA
123382140 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.225        
cufflinks 13.085     High  
cufflinks 18.543     High High
cufflinks 4.593        
cufflinks 14.815     High  
cufflinks 2.404       Low
cufflinks 6.57        
cufflinks 12.417     High  
cufflinks 9.59        

0 Strain