Gene : Medtr8g102160 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR31513:SF1 - GLYCINE-RICH PROTEIN Description:  transmembrane protein, putative
Genomic Order:  5426 Name:  ? Medtr8g102160
Secondary Identifier:  ? PAC:31075739
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g102160 0.5kb upstream 0.5kb upstream 11794   true chr8: 42959750-42971543 Medicago truncatula
Medtr8g102160 0.5kb upstream 0.5kb upstream 500   false chr8: 42959750-42960249 Medicago truncatula
Medtr8g102160 0.5kb downstream 0.5kb downstream 11794   true chr8: 42960250-42972043 Medicago truncatula
Medtr8g102160 0.5kb downstream 0.5kb downstream 500   false chr8: 42971544-42972043 Medicago truncatula
Medtr8g102160 1.0kb upstream 1.0kb upstream 12294   true chr8: 42959250-42971543 Medicago truncatula
Medtr8g102160 1.0kb upstream 1.0kb upstream 1000   false chr8: 42959250-42960249 Medicago truncatula
Medtr8g102160 1.0kb downstream 1.0kb downstream 12294   true chr8: 42960250-42972543 Medicago truncatula
Medtr8g102160 1.0kb downstream 1.0kb downstream 1000   false chr8: 42971544-42972543 Medicago truncatula
Medtr8g102160 2.0kb upstream 2.0kb upstream 13294   true chr8: 42958250-42971543 Medicago truncatula
Medtr8g102160 2.0kb upstream 2.0kb upstream 2000   false chr8: 42958250-42960249 Medicago truncatula
Medtr8g102160 2.0kb downstream 2.0kb downstream 13294   true chr8: 42960250-42973543 Medicago truncatula
Medtr8g102160 2.0kb downstream 2.0kb downstream 2000   false chr8: 42971544-42973543 Medicago truncatula
Medtr8g102160 5.0kb upstream 5.0kb upstream 16294   true chr8: 42955250-42971543 Medicago truncatula
Medtr8g102160 5.0kb upstream 5.0kb upstream 5000   false chr8: 42955250-42960249 Medicago truncatula
Medtr8g102160 5.0kb downstream 5.0kb downstream 16294   true chr8: 42960250-42976543 Medicago truncatula
Medtr8g102160 5.0kb downstream 5.0kb downstream 5000   false chr8: 42971544-42976543 Medicago truncatula
Medtr8g102160 10.0kb upstream 10.0kb upstream 21294   true chr8: 42950250-42971543 Medicago truncatula
Medtr8g102160 10.0kb upstream 10.0kb upstream 10000   false chr8: 42950250-42960249 Medicago truncatula
Medtr8g102160 10.0kb downstream 10.0kb downstream 21294   true chr8: 42960250-42981543 Medicago truncatula
Medtr8g102160 10.0kb downstream 10.0kb downstream 10000   false chr8: 42971544-42981543 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305302 5265 Fabidae View MSA
124073287 5270 Rosid View MSA
123741641 5271 Pentapetalae View MSA
122787770 5272 Eudicot View MSA
122043442 5273 Angiosperm View MSA
121344544 5274 Embryophyte View MSA
123380062 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.71        
cufflinks 6.591        
cufflinks 6.413        
cufflinks 5.529        
cufflinks 6.45        
cufflinks 2.516       Low
cufflinks 4.99        
cufflinks 5.485        
cufflinks 3.788        

0 Strain