Gene : Medtr8g102100 M. truncatula Mt4.0v1
Defline:  (1 of 52) PF00642 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) Description:  zinc finger CCCH domain protein
Genomic Order:  5421 Name:  ? Medtr8g102100
Secondary Identifier:  ? PAC:31075139
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g102100 0.5kb upstream 0.5kb upstream 2609   true chr8: 42925060-42927668 Medicago truncatula
Medtr8g102100 0.5kb upstream 0.5kb upstream 500   false chr8: 42927169-42927668 Medicago truncatula
Medtr8g102100 0.5kb downstream 0.5kb downstream 2609   true chr8: 42924560-42927168 Medicago truncatula
Medtr8g102100 0.5kb downstream 0.5kb downstream 500   false chr8: 42924560-42925059 Medicago truncatula
Medtr8g102100 1.0kb upstream 1.0kb upstream 3109   true chr8: 42925060-42928168 Medicago truncatula
Medtr8g102100 1.0kb upstream 1.0kb upstream 1000   false chr8: 42927169-42928168 Medicago truncatula
Medtr8g102100 1.0kb downstream 1.0kb downstream 3109   true chr8: 42924060-42927168 Medicago truncatula
Medtr8g102100 1.0kb downstream 1.0kb downstream 1000   false chr8: 42924060-42925059 Medicago truncatula
Medtr8g102100 2.0kb upstream 2.0kb upstream 4109   true chr8: 42925060-42929168 Medicago truncatula
Medtr8g102100 2.0kb upstream 2.0kb upstream 2000   false chr8: 42927169-42929168 Medicago truncatula
Medtr8g102100 2.0kb downstream 2.0kb downstream 4109   true chr8: 42923060-42927168 Medicago truncatula
Medtr8g102100 2.0kb downstream 2.0kb downstream 2000   false chr8: 42923060-42925059 Medicago truncatula
Medtr8g102100 5.0kb upstream 5.0kb upstream 7109   true chr8: 42925060-42932168 Medicago truncatula
Medtr8g102100 5.0kb upstream 5.0kb upstream 5000   false chr8: 42927169-42932168 Medicago truncatula
Medtr8g102100 5.0kb downstream 5.0kb downstream 7109   true chr8: 42920060-42927168 Medicago truncatula
Medtr8g102100 5.0kb downstream 5.0kb downstream 5000   false chr8: 42920060-42925059 Medicago truncatula
Medtr8g102100 10.0kb upstream 10.0kb upstream 12109   true chr8: 42925060-42937168 Medicago truncatula
Medtr8g102100 10.0kb upstream 10.0kb upstream 10000   false chr8: 42927169-42937168 Medicago truncatula
Medtr8g102100 10.0kb downstream 10.0kb downstream 12109   true chr8: 42915060-42927168 Medicago truncatula
Medtr8g102100 10.0kb downstream 10.0kb downstream 10000   false chr8: 42915060-42925059 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310889 5265 Fabidae View MSA
124070432 5270 Rosid View MSA
123751061 5271 Pentapetalae View MSA
122788502 5272 Eudicot View MSA
122046777 5273 Angiosperm View MSA
123429052 5275 Viridiplantae View MSA
121351105 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 237.344     High High
cufflinks 40.725     High Low
cufflinks 56.581     High  
cufflinks 219.617     High High
cufflinks 41.536     High Low
cufflinks 78.153     High  
cufflinks 118.637     High  
cufflinks 52.491     High  
cufflinks 225.803     High High

0 Strain