Gene : Medtr8g102020 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR22761:SF8 - VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 32 HOMOLOG 1-RELATED Description:  charged multivesicular body protein
Genomic Order:  5412 Name:  ? Medtr8g102020
Secondary Identifier:  ? PAC:31069493
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g102020 0.5kb upstream 0.5kb upstream 4799   true chr8: 42880224-42885022 Medicago truncatula
Medtr8g102020 0.5kb upstream 0.5kb upstream 500   false chr8: 42880224-42880723 Medicago truncatula
Medtr8g102020 0.5kb downstream 0.5kb downstream 4799   true chr8: 42880724-42885522 Medicago truncatula
Medtr8g102020 0.5kb downstream 0.5kb downstream 500   false chr8: 42885023-42885522 Medicago truncatula
Medtr8g102020 1.0kb upstream 1.0kb upstream 5299   true chr8: 42879724-42885022 Medicago truncatula
Medtr8g102020 1.0kb upstream 1.0kb upstream 1000   false chr8: 42879724-42880723 Medicago truncatula
Medtr8g102020 1.0kb downstream 1.0kb downstream 5299   true chr8: 42880724-42886022 Medicago truncatula
Medtr8g102020 1.0kb downstream 1.0kb downstream 1000   false chr8: 42885023-42886022 Medicago truncatula
Medtr8g102020 2.0kb upstream 2.0kb upstream 6299   true chr8: 42878724-42885022 Medicago truncatula
Medtr8g102020 2.0kb upstream 2.0kb upstream 2000   false chr8: 42878724-42880723 Medicago truncatula
Medtr8g102020 2.0kb downstream 2.0kb downstream 6299   true chr8: 42880724-42887022 Medicago truncatula
Medtr8g102020 2.0kb downstream 2.0kb downstream 2000   false chr8: 42885023-42887022 Medicago truncatula
Medtr8g102020 5.0kb upstream 5.0kb upstream 9299   true chr8: 42875724-42885022 Medicago truncatula
Medtr8g102020 5.0kb upstream 5.0kb upstream 5000   false chr8: 42875724-42880723 Medicago truncatula
Medtr8g102020 5.0kb downstream 5.0kb downstream 9299   true chr8: 42880724-42890022 Medicago truncatula
Medtr8g102020 5.0kb downstream 5.0kb downstream 5000   false chr8: 42885023-42890022 Medicago truncatula
Medtr8g102020 10.0kb upstream 10.0kb upstream 14299   true chr8: 42870724-42885022 Medicago truncatula
Medtr8g102020 10.0kb upstream 10.0kb upstream 10000   false chr8: 42870724-42880723 Medicago truncatula
Medtr8g102020 10.0kb downstream 10.0kb downstream 14299   true chr8: 42880724-42895022 Medicago truncatula
Medtr8g102020 10.0kb downstream 10.0kb downstream 10000   false chr8: 42885023-42895022 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121656542 5273 Angiosperm View MSA
122298969 5265 Fabidae View MSA
124036654 5270 Rosid View MSA
123609937 5271 Pentapetalae View MSA
122644575 5272 Eudicot View MSA
120928615 5274 Embryophyte View MSA
123426511 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.011        
cufflinks 1.144        
cufflinks 1.979       High
cufflinks 0.176       Low
cufflinks 1.676        
cufflinks 0.144       Low
cufflinks 0.391        
cufflinks 1.279        
cufflinks 0.456        

0 Strain