Gene : Medtr8g101880 M. truncatula Mt4.0v1
Defline:  (1 of 4) PF04718 - Mitochondrial ATP synthase g subunit (ATP-synt_G) Description:  ATP synthase G subunit family protein
Genomic Order:  5400 Name:  ? Medtr8g101880
Secondary Identifier:  ? PAC:31072508
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g101880 0.5kb upstream 0.5kb upstream 3923   true chr8: 42819926-42823848 Medicago truncatula
Medtr8g101880 0.5kb upstream 0.5kb upstream 500   false chr8: 42819926-42820425 Medicago truncatula
Medtr8g101880 0.5kb downstream 0.5kb downstream 3923   true chr8: 42820426-42824348 Medicago truncatula
Medtr8g101880 0.5kb downstream 0.5kb downstream 500   false chr8: 42823849-42824348 Medicago truncatula
Medtr8g101880 1.0kb upstream 1.0kb upstream 4423   true chr8: 42819426-42823848 Medicago truncatula
Medtr8g101880 1.0kb upstream 1.0kb upstream 1000   false chr8: 42819426-42820425 Medicago truncatula
Medtr8g101880 1.0kb downstream 1.0kb downstream 4423   true chr8: 42820426-42824848 Medicago truncatula
Medtr8g101880 1.0kb downstream 1.0kb downstream 1000   false chr8: 42823849-42824848 Medicago truncatula
Medtr8g101880 2.0kb upstream 2.0kb upstream 5423   true chr8: 42818426-42823848 Medicago truncatula
Medtr8g101880 2.0kb upstream 2.0kb upstream 2000   false chr8: 42818426-42820425 Medicago truncatula
Medtr8g101880 2.0kb downstream 2.0kb downstream 5423   true chr8: 42820426-42825848 Medicago truncatula
Medtr8g101880 2.0kb downstream 2.0kb downstream 2000   false chr8: 42823849-42825848 Medicago truncatula
Medtr8g101880 5.0kb upstream 5.0kb upstream 8423   true chr8: 42815426-42823848 Medicago truncatula
Medtr8g101880 5.0kb upstream 5.0kb upstream 5000   false chr8: 42815426-42820425 Medicago truncatula
Medtr8g101880 5.0kb downstream 5.0kb downstream 8423   true chr8: 42820426-42828848 Medicago truncatula
Medtr8g101880 5.0kb downstream 5.0kb downstream 5000   false chr8: 42823849-42828848 Medicago truncatula
Medtr8g101880 10.0kb upstream 10.0kb upstream 13423   true chr8: 42810426-42823848 Medicago truncatula
Medtr8g101880 10.0kb upstream 10.0kb upstream 10000   false chr8: 42810426-42820425 Medicago truncatula
Medtr8g101880 10.0kb downstream 10.0kb downstream 13423   true chr8: 42820426-42833848 Medicago truncatula
Medtr8g101880 10.0kb downstream 10.0kb downstream 10000   false chr8: 42823849-42833848 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315130 5265 Fabidae View MSA
124061170 5270 Rosid View MSA
123750868 5271 Pentapetalae View MSA
122796122 5272 Eudicot View MSA
122043209 5273 Angiosperm View MSA
121346657 5274 Embryophyte View MSA
123428530 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.431        
cufflinks 8.805        
cufflinks 7.104        
cufflinks 4.133        
cufflinks 11.892     High High
cufflinks 2.475       Low
cufflinks 8.211        
cufflinks 6.501        
cufflinks 10.54     High  

0 Strain