Gene : Medtr8g102530 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR11831:SF1 - U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN IMP3 Description:  U3 small nucleolar ribonucleoprotein IMP3
Genomic Order:  5453 Name:  ? Medtr8g102530
Secondary Identifier:  ? PAC:31072233
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g102530 0.5kb upstream 0.5kb upstream 3312   true chr8: 43167835-43171146 Medicago truncatula
Medtr8g102530 0.5kb upstream 0.5kb upstream 500   false chr8: 43167835-43168334 Medicago truncatula
Medtr8g102530 0.5kb downstream 0.5kb downstream 3312   true chr8: 43168335-43171646 Medicago truncatula
Medtr8g102530 0.5kb downstream 0.5kb downstream 500   false chr8: 43171147-43171646 Medicago truncatula
Medtr8g102530 1.0kb upstream 1.0kb upstream 3812   true chr8: 43167335-43171146 Medicago truncatula
Medtr8g102530 1.0kb upstream 1.0kb upstream 1000   false chr8: 43167335-43168334 Medicago truncatula
Medtr8g102530 1.0kb downstream 1.0kb downstream 3812   true chr8: 43168335-43172146 Medicago truncatula
Medtr8g102530 1.0kb downstream 1.0kb downstream 1000   false chr8: 43171147-43172146 Medicago truncatula
Medtr8g102530 2.0kb upstream 2.0kb upstream 4812   true chr8: 43166335-43171146 Medicago truncatula
Medtr8g102530 2.0kb upstream 2.0kb upstream 2000   false chr8: 43166335-43168334 Medicago truncatula
Medtr8g102530 2.0kb downstream 2.0kb downstream 4812   true chr8: 43168335-43173146 Medicago truncatula
Medtr8g102530 2.0kb downstream 2.0kb downstream 2000   false chr8: 43171147-43173146 Medicago truncatula
Medtr8g102530 5.0kb upstream 5.0kb upstream 7812   true chr8: 43163335-43171146 Medicago truncatula
Medtr8g102530 5.0kb upstream 5.0kb upstream 5000   false chr8: 43163335-43168334 Medicago truncatula
Medtr8g102530 5.0kb downstream 5.0kb downstream 7812   true chr8: 43168335-43176146 Medicago truncatula
Medtr8g102530 5.0kb downstream 5.0kb downstream 5000   false chr8: 43171147-43176146 Medicago truncatula
Medtr8g102530 10.0kb upstream 10.0kb upstream 12812   true chr8: 43158335-43171146 Medicago truncatula
Medtr8g102530 10.0kb upstream 10.0kb upstream 10000   false chr8: 43158335-43168334 Medicago truncatula
Medtr8g102530 10.0kb downstream 10.0kb downstream 12812   true chr8: 43168335-43181146 Medicago truncatula
Medtr8g102530 10.0kb downstream 10.0kb downstream 10000   false chr8: 43171147-43181146 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308325 5265 Fabidae View MSA
124067940 5270 Rosid View MSA
123740372 5271 Pentapetalae View MSA
122792450 5272 Eudicot View MSA
122044096 5273 Angiosperm View MSA
121345167 5274 Embryophyte View MSA
123424004 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.673       Low
cufflinks 2.962        
cufflinks 3.983       High
cufflinks 3.882       High
cufflinks 2.87        
cufflinks 3.346        
cufflinks 3.36        
cufflinks 3.31        
cufflinks 3.277        

0 Strain