Gene : Medtr8g093500 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR12565:SF125 - TRANSCRIPTION FACTOR HEC3-RELATED Description:  basic helix loop helix (BHLH) DNA-binding family protein
Genomic Order:  4883 Name:  ? Medtr8g093500
Secondary Identifier:  ? PAC:31072758
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g093500 0.5kb upstream 0.5kb upstream 1400   true chr8: 39072620-39074019 Medicago truncatula
Medtr8g093500 0.5kb upstream 0.5kb upstream 500   false chr8: 39072620-39073119 Medicago truncatula
Medtr8g093500 0.5kb downstream 0.5kb downstream 1400   true chr8: 39073120-39074519 Medicago truncatula
Medtr8g093500 0.5kb downstream 0.5kb downstream 500   false chr8: 39074020-39074519 Medicago truncatula
Medtr8g093500 1.0kb upstream 1.0kb upstream 1900   true chr8: 39072120-39074019 Medicago truncatula
Medtr8g093500 1.0kb upstream 1.0kb upstream 1000   false chr8: 39072120-39073119 Medicago truncatula
Medtr8g093500 1.0kb downstream 1.0kb downstream 1900   true chr8: 39073120-39075019 Medicago truncatula
Medtr8g093500 1.0kb downstream 1.0kb downstream 1000   false chr8: 39074020-39075019 Medicago truncatula
Medtr8g093500 2.0kb upstream 2.0kb upstream 2900   true chr8: 39071120-39074019 Medicago truncatula
Medtr8g093500 2.0kb upstream 2.0kb upstream 2000   false chr8: 39071120-39073119 Medicago truncatula
Medtr8g093500 2.0kb downstream 2.0kb downstream 2900   true chr8: 39073120-39076019 Medicago truncatula
Medtr8g093500 2.0kb downstream 2.0kb downstream 2000   false chr8: 39074020-39076019 Medicago truncatula
Medtr8g093500 5.0kb upstream 5.0kb upstream 5900   true chr8: 39068120-39074019 Medicago truncatula
Medtr8g093500 5.0kb upstream 5.0kb upstream 5000   false chr8: 39068120-39073119 Medicago truncatula
Medtr8g093500 5.0kb downstream 5.0kb downstream 5900   true chr8: 39073120-39079019 Medicago truncatula
Medtr8g093500 5.0kb downstream 5.0kb downstream 5000   false chr8: 39074020-39079019 Medicago truncatula
Medtr8g093500 10.0kb upstream 10.0kb upstream 10900   true chr8: 39063120-39074019 Medicago truncatula
Medtr8g093500 10.0kb upstream 10.0kb upstream 10000   false chr8: 39063120-39073119 Medicago truncatula
Medtr8g093500 10.0kb downstream 10.0kb downstream 10900   true chr8: 39073120-39084019 Medicago truncatula
Medtr8g093500 10.0kb downstream 10.0kb downstream 10000   false chr8: 39074020-39084019 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312340 5265 Fabidae View MSA
124065698 5270 Rosid View MSA
123745456 5271 Pentapetalae View MSA
122795730 5272 Eudicot View MSA
122049789 5273 Angiosperm View MSA
121351233 5274 Embryophyte View MSA
123382070 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.011     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain