Gene : Medtr8g093870 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR13533:SF5 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 14-RELATED Description:  Pmr5/Cas1p GDSL/SGNH-like acyl-esterase family protein
Genomic Order:  4908 Name:  ? Medtr8g093870
Secondary Identifier:  ? PAC:31075899
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g093870 0.5kb upstream 0.5kb upstream 4877   true chr8: 39277454-39282330 Medicago truncatula
Medtr8g093870 0.5kb upstream 0.5kb upstream 500   false chr8: 39281831-39282330 Medicago truncatula
Medtr8g093870 0.5kb downstream 0.5kb downstream 4877   true chr8: 39276954-39281830 Medicago truncatula
Medtr8g093870 0.5kb downstream 0.5kb downstream 500   false chr8: 39276954-39277453 Medicago truncatula
Medtr8g093870 1.0kb upstream 1.0kb upstream 5377   true chr8: 39277454-39282830 Medicago truncatula
Medtr8g093870 1.0kb upstream 1.0kb upstream 1000   false chr8: 39281831-39282830 Medicago truncatula
Medtr8g093870 1.0kb downstream 1.0kb downstream 5377   true chr8: 39276454-39281830 Medicago truncatula
Medtr8g093870 1.0kb downstream 1.0kb downstream 1000   false chr8: 39276454-39277453 Medicago truncatula
Medtr8g093870 2.0kb upstream 2.0kb upstream 6377   true chr8: 39277454-39283830 Medicago truncatula
Medtr8g093870 2.0kb upstream 2.0kb upstream 2000   false chr8: 39281831-39283830 Medicago truncatula
Medtr8g093870 2.0kb downstream 2.0kb downstream 6377   true chr8: 39275454-39281830 Medicago truncatula
Medtr8g093870 2.0kb downstream 2.0kb downstream 2000   false chr8: 39275454-39277453 Medicago truncatula
Medtr8g093870 5.0kb upstream 5.0kb upstream 9377   true chr8: 39277454-39286830 Medicago truncatula
Medtr8g093870 5.0kb upstream 5.0kb upstream 5000   false chr8: 39281831-39286830 Medicago truncatula
Medtr8g093870 5.0kb downstream 5.0kb downstream 9377   true chr8: 39272454-39281830 Medicago truncatula
Medtr8g093870 5.0kb downstream 5.0kb downstream 5000   false chr8: 39272454-39277453 Medicago truncatula
Medtr8g093870 10.0kb upstream 10.0kb upstream 14377   true chr8: 39277454-39291830 Medicago truncatula
Medtr8g093870 10.0kb upstream 10.0kb upstream 10000   false chr8: 39281831-39291830 Medicago truncatula
Medtr8g093870 10.0kb downstream 10.0kb downstream 14377   true chr8: 39267454-39281830 Medicago truncatula
Medtr8g093870 10.0kb downstream 10.0kb downstream 10000   false chr8: 39267454-39277453 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310420 5265 Fabidae View MSA
124073256 5270 Rosid View MSA
123736665 5271 Pentapetalae View MSA
122795116 5272 Eudicot View MSA
122045954 5273 Angiosperm View MSA
123428901 5275 Viridiplantae View MSA
121351071 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.372        
cufflinks 3.517        
cufflinks 3.884        
cufflinks 2.311       Low
cufflinks 4.895       High
cufflinks 1.639       Low
cufflinks 3.3        
cufflinks 3.525        
cufflinks 4.044        

0 Strain