Gene : Medtr8g095470 M. truncatula Mt4.0v1
Defline:  (1 of 35) PF05678 - VQ motif (VQ) Description:  VQ motif protein
Genomic Order:  5010 Name:  ? Medtr8g095470
Secondary Identifier:  ? PAC:31072864
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g095470 0.5kb upstream 0.5kb upstream 3635   true chr8: 39955693-39959327 Medicago truncatula
Medtr8g095470 0.5kb upstream 0.5kb upstream 500   false chr8: 39958828-39959327 Medicago truncatula
Medtr8g095470 0.5kb downstream 0.5kb downstream 3635   true chr8: 39955193-39958827 Medicago truncatula
Medtr8g095470 0.5kb downstream 0.5kb downstream 500   false chr8: 39955193-39955692 Medicago truncatula
Medtr8g095470 1.0kb upstream 1.0kb upstream 4135   true chr8: 39955693-39959827 Medicago truncatula
Medtr8g095470 1.0kb upstream 1.0kb upstream 1000   false chr8: 39958828-39959827 Medicago truncatula
Medtr8g095470 1.0kb downstream 1.0kb downstream 4135   true chr8: 39954693-39958827 Medicago truncatula
Medtr8g095470 1.0kb downstream 1.0kb downstream 1000   false chr8: 39954693-39955692 Medicago truncatula
Medtr8g095470 2.0kb upstream 2.0kb upstream 5135   true chr8: 39955693-39960827 Medicago truncatula
Medtr8g095470 2.0kb upstream 2.0kb upstream 2000   false chr8: 39958828-39960827 Medicago truncatula
Medtr8g095470 2.0kb downstream 2.0kb downstream 5135   true chr8: 39953693-39958827 Medicago truncatula
Medtr8g095470 2.0kb downstream 2.0kb downstream 2000   false chr8: 39953693-39955692 Medicago truncatula
Medtr8g095470 5.0kb upstream 5.0kb upstream 8135   true chr8: 39955693-39963827 Medicago truncatula
Medtr8g095470 5.0kb upstream 5.0kb upstream 5000   false chr8: 39958828-39963827 Medicago truncatula
Medtr8g095470 5.0kb downstream 5.0kb downstream 8135   true chr8: 39950693-39958827 Medicago truncatula
Medtr8g095470 5.0kb downstream 5.0kb downstream 5000   false chr8: 39950693-39955692 Medicago truncatula
Medtr8g095470 10.0kb upstream 10.0kb upstream 13135   true chr8: 39955693-39968827 Medicago truncatula
Medtr8g095470 10.0kb upstream 10.0kb upstream 10000   false chr8: 39958828-39968827 Medicago truncatula
Medtr8g095470 10.0kb downstream 10.0kb downstream 13135   true chr8: 39945693-39958827 Medicago truncatula
Medtr8g095470 10.0kb downstream 10.0kb downstream 10000   false chr8: 39945693-39955692 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309756 5265 Fabidae View MSA
124071796 5270 Rosid View MSA
123750842 5271 Pentapetalae View MSA
122795090 5272 Eudicot View MSA
122046673 5273 Angiosperm View MSA
121347985 5274 Embryophyte View MSA
123380701 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.782       High
cufflinks 0.134        
cufflinks 0.203        
cufflinks 0.123        
cufflinks 0.11        
cufflinks 0.346        
cufflinks 0.391        
cufflinks 0.08       Low
cufflinks 0.156        

0 Strain