Gene : Medtr8g095460 M. truncatula Mt4.0v1
Defline:  (1 of 3) 2.7.8.7 - Holo-[acyl-carrier-protein] synthase / PPTase Description:  4'-phosphopantetheinyl transferase family protein
Genomic Order:  5009 Name:  ? Medtr8g095460
Secondary Identifier:  ? PAC:31070079
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-6012-1 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g095460 0.5kb upstream 0.5kb upstream 5112   true chr8: 39950151-39955262 Medicago truncatula
Medtr8g095460 0.5kb upstream 0.5kb upstream 500   false chr8: 39954763-39955262 Medicago truncatula
Medtr8g095460 0.5kb downstream 0.5kb downstream 5112   true chr8: 39949651-39954762 Medicago truncatula
Medtr8g095460 0.5kb downstream 0.5kb downstream 500   false chr8: 39949651-39950150 Medicago truncatula
Medtr8g095460 1.0kb upstream 1.0kb upstream 5612   true chr8: 39950151-39955762 Medicago truncatula
Medtr8g095460 1.0kb upstream 1.0kb upstream 1000   false chr8: 39954763-39955762 Medicago truncatula
Medtr8g095460 1.0kb downstream 1.0kb downstream 5612   true chr8: 39949151-39954762 Medicago truncatula
Medtr8g095460 1.0kb downstream 1.0kb downstream 1000   false chr8: 39949151-39950150 Medicago truncatula
Medtr8g095460 2.0kb upstream 2.0kb upstream 6612   true chr8: 39950151-39956762 Medicago truncatula
Medtr8g095460 2.0kb upstream 2.0kb upstream 2000   false chr8: 39954763-39956762 Medicago truncatula
Medtr8g095460 2.0kb downstream 2.0kb downstream 6612   true chr8: 39948151-39954762 Medicago truncatula
Medtr8g095460 2.0kb downstream 2.0kb downstream 2000   false chr8: 39948151-39950150 Medicago truncatula
Medtr8g095460 5.0kb upstream 5.0kb upstream 9612   true chr8: 39950151-39959762 Medicago truncatula
Medtr8g095460 5.0kb upstream 5.0kb upstream 5000   false chr8: 39954763-39959762 Medicago truncatula
Medtr8g095460 5.0kb downstream 5.0kb downstream 9612   true chr8: 39945151-39954762 Medicago truncatula
Medtr8g095460 5.0kb downstream 5.0kb downstream 5000   false chr8: 39945151-39950150 Medicago truncatula
Medtr8g095460 10.0kb upstream 10.0kb upstream 14612   true chr8: 39950151-39964762 Medicago truncatula
Medtr8g095460 10.0kb upstream 10.0kb upstream 10000   false chr8: 39954763-39964762 Medicago truncatula
Medtr8g095460 10.0kb downstream 10.0kb downstream 14612   true chr8: 39940151-39954762 Medicago truncatula
Medtr8g095460 10.0kb downstream 10.0kb downstream 10000   false chr8: 39940151-39950150 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308786 5265 Fabidae View MSA
124062449 5270 Rosid View MSA
123736560 5271 Pentapetalae View MSA
122793006 5272 Eudicot View MSA
122041832 5273 Angiosperm View MSA
123429078 5275 Viridiplantae View MSA
121344089 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.816        
cufflinks 0.638        
cufflinks 0.814        
cufflinks 0.78        
cufflinks 0.656        
cufflinks 0.342       Low
cufflinks 0.857        
cufflinks 0.706        
cufflinks 0.583        

0 Strain