Gene : Medtr8g096670 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR12300//PTHR12300:SF56 - HVA22-LIKE PROTEINS Description:  TB2/DP1, HVA22 family protein
Genomic Order:  5096 Name:  ? Medtr8g096670
Secondary Identifier:  ? PAC:31071003
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g096670 0.5kb upstream 0.5kb upstream 1820   true chr8: 40548847-40550666 Medicago truncatula
Medtr8g096670 0.5kb upstream 0.5kb upstream 500   false chr8: 40550167-40550666 Medicago truncatula
Medtr8g096670 0.5kb downstream 0.5kb downstream 1820   true chr8: 40548347-40550166 Medicago truncatula
Medtr8g096670 0.5kb downstream 0.5kb downstream 500   false chr8: 40548347-40548846 Medicago truncatula
Medtr8g096670 1.0kb upstream 1.0kb upstream 2320   true chr8: 40548847-40551166 Medicago truncatula
Medtr8g096670 1.0kb upstream 1.0kb upstream 1000   false chr8: 40550167-40551166 Medicago truncatula
Medtr8g096670 1.0kb downstream 1.0kb downstream 2320   true chr8: 40547847-40550166 Medicago truncatula
Medtr8g096670 1.0kb downstream 1.0kb downstream 1000   false chr8: 40547847-40548846 Medicago truncatula
Medtr8g096670 2.0kb upstream 2.0kb upstream 3320   true chr8: 40548847-40552166 Medicago truncatula
Medtr8g096670 2.0kb upstream 2.0kb upstream 2000   false chr8: 40550167-40552166 Medicago truncatula
Medtr8g096670 2.0kb downstream 2.0kb downstream 3320   true chr8: 40546847-40550166 Medicago truncatula
Medtr8g096670 2.0kb downstream 2.0kb downstream 2000   false chr8: 40546847-40548846 Medicago truncatula
Medtr8g096670 5.0kb upstream 5.0kb upstream 6320   true chr8: 40548847-40555166 Medicago truncatula
Medtr8g096670 5.0kb upstream 5.0kb upstream 5000   false chr8: 40550167-40555166 Medicago truncatula
Medtr8g096670 5.0kb downstream 5.0kb downstream 6320   true chr8: 40543847-40550166 Medicago truncatula
Medtr8g096670 5.0kb downstream 5.0kb downstream 5000   false chr8: 40543847-40548846 Medicago truncatula
Medtr8g096670 10.0kb upstream 10.0kb upstream 11320   true chr8: 40548847-40560166 Medicago truncatula
Medtr8g096670 10.0kb upstream 10.0kb upstream 10000   false chr8: 40550167-40560166 Medicago truncatula
Medtr8g096670 10.0kb downstream 10.0kb downstream 11320   true chr8: 40538847-40550166 Medicago truncatula
Medtr8g096670 10.0kb downstream 10.0kb downstream 10000   false chr8: 40538847-40548846 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122289212 5265 Fabidae View MSA
124062938 5270 Rosid View MSA
123747497 5271 Pentapetalae View MSA
122794612 5272 Eudicot View MSA
122049450 5273 Angiosperm View MSA
121349779 5274 Embryophyte View MSA
123427624 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.7        
cufflinks 1.666        
cufflinks 1.101       Low
cufflinks 11.596     High High
cufflinks 1.757        
cufflinks 8.244        
cufflinks 8.859        
cufflinks 1.536        
cufflinks 9.968       High

0 Strain