Gene : Medtr8g098275 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR11514:SF37 - TRANSCRIPTION FACTOR EGL1-RELATED Description:  bHLH transcription factor
Genomic Order:  5161 Name:  ? Medtr8g098275
Secondary Identifier:  ? PAC:31071108
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g098275 0.5kb upstream 0.5kb upstream 4988   true chr8: 40999855-41004842 Medicago truncatula
Medtr8g098275 0.5kb upstream 0.5kb upstream 500   false chr8: 40999855-41000354 Medicago truncatula
Medtr8g098275 0.5kb downstream 0.5kb downstream 4988   true chr8: 41000355-41005342 Medicago truncatula
Medtr8g098275 0.5kb downstream 0.5kb downstream 500   false chr8: 41004843-41005342 Medicago truncatula
Medtr8g098275 1.0kb upstream 1.0kb upstream 5488   true chr8: 40999355-41004842 Medicago truncatula
Medtr8g098275 1.0kb upstream 1.0kb upstream 1000   false chr8: 40999355-41000354 Medicago truncatula
Medtr8g098275 1.0kb downstream 1.0kb downstream 5488   true chr8: 41000355-41005842 Medicago truncatula
Medtr8g098275 1.0kb downstream 1.0kb downstream 1000   false chr8: 41004843-41005842 Medicago truncatula
Medtr8g098275 2.0kb upstream 2.0kb upstream 6488   true chr8: 40998355-41004842 Medicago truncatula
Medtr8g098275 2.0kb upstream 2.0kb upstream 2000   false chr8: 40998355-41000354 Medicago truncatula
Medtr8g098275 2.0kb downstream 2.0kb downstream 6488   true chr8: 41000355-41006842 Medicago truncatula
Medtr8g098275 2.0kb downstream 2.0kb downstream 2000   false chr8: 41004843-41006842 Medicago truncatula
Medtr8g098275 5.0kb upstream 5.0kb upstream 9488   true chr8: 40995355-41004842 Medicago truncatula
Medtr8g098275 5.0kb upstream 5.0kb upstream 5000   false chr8: 40995355-41000354 Medicago truncatula
Medtr8g098275 5.0kb downstream 5.0kb downstream 9488   true chr8: 41000355-41009842 Medicago truncatula
Medtr8g098275 5.0kb downstream 5.0kb downstream 5000   false chr8: 41004843-41009842 Medicago truncatula
Medtr8g098275 10.0kb upstream 10.0kb upstream 14488   true chr8: 40990355-41004842 Medicago truncatula
Medtr8g098275 10.0kb upstream 10.0kb upstream 10000   false chr8: 40990355-41000354 Medicago truncatula
Medtr8g098275 10.0kb downstream 10.0kb downstream 14488   true chr8: 41000355-41014842 Medicago truncatula
Medtr8g098275 10.0kb downstream 10.0kb downstream 10000   false chr8: 41004843-41014842 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302099 5265 Fabidae View MSA
124074803 5270 Rosid View MSA
123747092 5271 Pentapetalae View MSA
122794545 5272 Eudicot View MSA
122045232 5273 Angiosperm View MSA
121347746 5274 Embryophyte View MSA
123380612 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.735        
cufflinks 0.861        
cufflinks 0.922        
cufflinks 0.597       Low
cufflinks 1.363        
cufflinks 0.935        
cufflinks 2.958       High
cufflinks 0.723        
cufflinks 1.355        

0 Strain