Gene : Medtr8g098320 M. truncatula Mt4.0v1
Defline:  (1 of 6) 5.3.1.6 - Ribose-5-phosphate isomerase / Ribose phosphate isomerase Description:  DNA-damage-repair/toleration protein DRT102
Genomic Order:  5150 Name:  ? Medtr8g098320
Secondary Identifier:  ? PAC:31074334
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5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula CALVIN-PWY Medicago truncatula pathologic  
Mtruncatula NONOXIPENT-PWY Medicago truncatula pathologic  
Mtruncatula PENTOSE-P-PWY Medicago truncatula pathologic  
Mtruncatula PHOTOALL-PWY Medicago truncatula pathologic  
Mtruncatula PWY-5723 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g098320 0.5kb upstream 0.5kb upstream 1212   true chr8: 40933473-40934684 Medicago truncatula
Medtr8g098320 0.5kb upstream 0.5kb upstream 500   false chr8: 40934185-40934684 Medicago truncatula
Medtr8g098320 0.5kb downstream 0.5kb downstream 1212   true chr8: 40932973-40934184 Medicago truncatula
Medtr8g098320 0.5kb downstream 0.5kb downstream 500   false chr8: 40932973-40933472 Medicago truncatula
Medtr8g098320 1.0kb upstream 1.0kb upstream 1712   true chr8: 40933473-40935184 Medicago truncatula
Medtr8g098320 1.0kb upstream 1.0kb upstream 1000   false chr8: 40934185-40935184 Medicago truncatula
Medtr8g098320 1.0kb downstream 1.0kb downstream 1712   true chr8: 40932473-40934184 Medicago truncatula
Medtr8g098320 1.0kb downstream 1.0kb downstream 1000   false chr8: 40932473-40933472 Medicago truncatula
Medtr8g098320 2.0kb upstream 2.0kb upstream 2712   true chr8: 40933473-40936184 Medicago truncatula
Medtr8g098320 2.0kb upstream 2.0kb upstream 2000   false chr8: 40934185-40936184 Medicago truncatula
Medtr8g098320 2.0kb downstream 2.0kb downstream 2712   true chr8: 40931473-40934184 Medicago truncatula
Medtr8g098320 2.0kb downstream 2.0kb downstream 2000   false chr8: 40931473-40933472 Medicago truncatula
Medtr8g098320 5.0kb upstream 5.0kb upstream 5712   true chr8: 40933473-40939184 Medicago truncatula
Medtr8g098320 5.0kb upstream 5.0kb upstream 5000   false chr8: 40934185-40939184 Medicago truncatula
Medtr8g098320 5.0kb downstream 5.0kb downstream 5712   true chr8: 40928473-40934184 Medicago truncatula
Medtr8g098320 5.0kb downstream 5.0kb downstream 5000   false chr8: 40928473-40933472 Medicago truncatula
Medtr8g098320 10.0kb upstream 10.0kb upstream 10712   true chr8: 40933473-40944184 Medicago truncatula
Medtr8g098320 10.0kb upstream 10.0kb upstream 10000   false chr8: 40934185-40944184 Medicago truncatula
Medtr8g098320 10.0kb downstream 10.0kb downstream 10712   true chr8: 40923473-40934184 Medicago truncatula
Medtr8g098320 10.0kb downstream 10.0kb downstream 10000   false chr8: 40923473-40933472 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121781818 5273 Angiosperm View MSA
122289449 5265 Fabidae View MSA
124051931 5270 Rosid View MSA
123750676 5271 Pentapetalae View MSA
122773793 5272 Eudicot View MSA
121053380 5274 Embryophyte View MSA
123093403 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.622        
cufflinks 1.074        
cufflinks 0.967        
cufflinks 23.82     High High
cufflinks 0.964        
cufflinks 17.435     High  
cufflinks 16.935     High  
cufflinks 0.601       Low
cufflinks 34.721     High High

0 Strain