Gene : Medtr8g097380 M. truncatula Mt4.0v1
Defline:  (1 of 25) PF04525 - LURP-one-related (LOR) Description:  tubby C 2 protein
Genomic Order:  5132 Name:  ? Medtr8g097380
Secondary Identifier:  ? PAC:31069363
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g097380 0.5kb upstream 0.5kb upstream 1416   true chr8: 40806560-40807975 Medicago truncatula
Medtr8g097380 0.5kb upstream 0.5kb upstream 500   false chr8: 40807476-40807975 Medicago truncatula
Medtr8g097380 0.5kb downstream 0.5kb downstream 1416   true chr8: 40806060-40807475 Medicago truncatula
Medtr8g097380 0.5kb downstream 0.5kb downstream 500   false chr8: 40806060-40806559 Medicago truncatula
Medtr8g097380 1.0kb upstream 1.0kb upstream 1916   true chr8: 40806560-40808475 Medicago truncatula
Medtr8g097380 1.0kb upstream 1.0kb upstream 1000   false chr8: 40807476-40808475 Medicago truncatula
Medtr8g097380 1.0kb downstream 1.0kb downstream 1916   true chr8: 40805560-40807475 Medicago truncatula
Medtr8g097380 1.0kb downstream 1.0kb downstream 1000   false chr8: 40805560-40806559 Medicago truncatula
Medtr8g097380 2.0kb upstream 2.0kb upstream 2916   true chr8: 40806560-40809475 Medicago truncatula
Medtr8g097380 2.0kb upstream 2.0kb upstream 2000   false chr8: 40807476-40809475 Medicago truncatula
Medtr8g097380 2.0kb downstream 2.0kb downstream 2916   true chr8: 40804560-40807475 Medicago truncatula
Medtr8g097380 2.0kb downstream 2.0kb downstream 2000   false chr8: 40804560-40806559 Medicago truncatula
Medtr8g097380 5.0kb upstream 5.0kb upstream 5916   true chr8: 40806560-40812475 Medicago truncatula
Medtr8g097380 5.0kb upstream 5.0kb upstream 5000   false chr8: 40807476-40812475 Medicago truncatula
Medtr8g097380 5.0kb downstream 5.0kb downstream 5916   true chr8: 40801560-40807475 Medicago truncatula
Medtr8g097380 5.0kb downstream 5.0kb downstream 5000   false chr8: 40801560-40806559 Medicago truncatula
Medtr8g097380 10.0kb upstream 10.0kb upstream 10916   true chr8: 40806560-40817475 Medicago truncatula
Medtr8g097380 10.0kb upstream 10.0kb upstream 10000   false chr8: 40807476-40817475 Medicago truncatula
Medtr8g097380 10.0kb downstream 10.0kb downstream 10916   true chr8: 40796560-40807475 Medicago truncatula
Medtr8g097380 10.0kb downstream 10.0kb downstream 10000   false chr8: 40796560-40806559 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305151 5265 Fabidae View MSA
124063316 5270 Rosid View MSA
123746736 5271 Pentapetalae View MSA
122786164 5272 Eudicot View MSA
122048996 5273 Angiosperm View MSA
121311201 5274 Embryophyte View MSA
123348527 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.673        
cufflinks 4.262        
cufflinks 4.442        
cufflinks 1.391       Low
cufflinks 6.335        
cufflinks 1.533       Low
cufflinks 5.717        
cufflinks 4.787        
cufflinks 6.726       High

0 Strain