Gene : Medtr8g097390 M. truncatula Mt4.0v1
Defline:  (1 of 25) PF04525 - LURP-one-related (LOR) Description:  tubby C 2 protein
Genomic Order:  5133 Name:  ? Medtr8g097390
Secondary Identifier:  ? PAC:31072375
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g097390 0.5kb upstream 0.5kb upstream 1523   true chr8: 40811605-40813127 Medicago truncatula
Medtr8g097390 0.5kb upstream 0.5kb upstream 500   false chr8: 40812628-40813127 Medicago truncatula
Medtr8g097390 0.5kb downstream 0.5kb downstream 1523   true chr8: 40811105-40812627 Medicago truncatula
Medtr8g097390 0.5kb downstream 0.5kb downstream 500   false chr8: 40811105-40811604 Medicago truncatula
Medtr8g097390 1.0kb upstream 1.0kb upstream 2023   true chr8: 40811605-40813627 Medicago truncatula
Medtr8g097390 1.0kb upstream 1.0kb upstream 1000   false chr8: 40812628-40813627 Medicago truncatula
Medtr8g097390 1.0kb downstream 1.0kb downstream 2023   true chr8: 40810605-40812627 Medicago truncatula
Medtr8g097390 1.0kb downstream 1.0kb downstream 1000   false chr8: 40810605-40811604 Medicago truncatula
Medtr8g097390 2.0kb upstream 2.0kb upstream 3023   true chr8: 40811605-40814627 Medicago truncatula
Medtr8g097390 2.0kb upstream 2.0kb upstream 2000   false chr8: 40812628-40814627 Medicago truncatula
Medtr8g097390 2.0kb downstream 2.0kb downstream 3023   true chr8: 40809605-40812627 Medicago truncatula
Medtr8g097390 2.0kb downstream 2.0kb downstream 2000   false chr8: 40809605-40811604 Medicago truncatula
Medtr8g097390 5.0kb upstream 5.0kb upstream 6023   true chr8: 40811605-40817627 Medicago truncatula
Medtr8g097390 5.0kb upstream 5.0kb upstream 5000   false chr8: 40812628-40817627 Medicago truncatula
Medtr8g097390 5.0kb downstream 5.0kb downstream 6023   true chr8: 40806605-40812627 Medicago truncatula
Medtr8g097390 5.0kb downstream 5.0kb downstream 5000   false chr8: 40806605-40811604 Medicago truncatula
Medtr8g097390 10.0kb upstream 10.0kb upstream 11023   true chr8: 40811605-40822627 Medicago truncatula
Medtr8g097390 10.0kb upstream 10.0kb upstream 10000   false chr8: 40812628-40822627 Medicago truncatula
Medtr8g097390 10.0kb downstream 10.0kb downstream 11023   true chr8: 40801605-40812627 Medicago truncatula
Medtr8g097390 10.0kb downstream 10.0kb downstream 10000   false chr8: 40801605-40811604 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305151 5265 Fabidae View MSA
124063316 5270 Rosid View MSA
123746736 5271 Pentapetalae View MSA
122786164 5272 Eudicot View MSA
122048996 5273 Angiosperm View MSA
121311201 5274 Embryophyte View MSA
123348527 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.453        
cufflinks 0.633       Low
cufflinks 1.746        
cufflinks 5.494        
cufflinks 2.222        
cufflinks 5.73        
cufflinks 8.65       High
cufflinks 1.075       Low
cufflinks 4.001        

0 Strain