Gene : Medtr8g097350 M. truncatula Mt4.0v1
Defline:  (1 of 2) KOG0978//KOG4593 - E3 ubiquitin ligase involved in syntaxin degradation // Mitotic checkpoint protein MAD1 Description:  myosin heavy chain-like protein
Genomic Order:  5130 Name:  ? Medtr8g097350
Secondary Identifier:  ? PAC:31071824
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g097350 0.5kb upstream 0.5kb upstream 5574   true chr8: 40796385-40801958 Medicago truncatula
Medtr8g097350 0.5kb upstream 0.5kb upstream 500   false chr8: 40796385-40796884 Medicago truncatula
Medtr8g097350 0.5kb downstream 0.5kb downstream 5574   true chr8: 40796885-40802458 Medicago truncatula
Medtr8g097350 0.5kb downstream 0.5kb downstream 500   false chr8: 40801959-40802458 Medicago truncatula
Medtr8g097350 1.0kb upstream 1.0kb upstream 6074   true chr8: 40795885-40801958 Medicago truncatula
Medtr8g097350 1.0kb upstream 1.0kb upstream 1000   false chr8: 40795885-40796884 Medicago truncatula
Medtr8g097350 1.0kb downstream 1.0kb downstream 6074   true chr8: 40796885-40802958 Medicago truncatula
Medtr8g097350 1.0kb downstream 1.0kb downstream 1000   false chr8: 40801959-40802958 Medicago truncatula
Medtr8g097350 2.0kb upstream 2.0kb upstream 7074   true chr8: 40794885-40801958 Medicago truncatula
Medtr8g097350 2.0kb upstream 2.0kb upstream 2000   false chr8: 40794885-40796884 Medicago truncatula
Medtr8g097350 2.0kb downstream 2.0kb downstream 7074   true chr8: 40796885-40803958 Medicago truncatula
Medtr8g097350 2.0kb downstream 2.0kb downstream 2000   false chr8: 40801959-40803958 Medicago truncatula
Medtr8g097350 5.0kb upstream 5.0kb upstream 10074   true chr8: 40791885-40801958 Medicago truncatula
Medtr8g097350 5.0kb upstream 5.0kb upstream 5000   false chr8: 40791885-40796884 Medicago truncatula
Medtr8g097350 5.0kb downstream 5.0kb downstream 10074   true chr8: 40796885-40806958 Medicago truncatula
Medtr8g097350 5.0kb downstream 5.0kb downstream 5000   false chr8: 40801959-40806958 Medicago truncatula
Medtr8g097350 10.0kb upstream 10.0kb upstream 15074   true chr8: 40786885-40801958 Medicago truncatula
Medtr8g097350 10.0kb upstream 10.0kb upstream 10000   false chr8: 40786885-40796884 Medicago truncatula
Medtr8g097350 10.0kb downstream 10.0kb downstream 15074   true chr8: 40796885-40811958 Medicago truncatula
Medtr8g097350 10.0kb downstream 10.0kb downstream 10000   false chr8: 40801959-40811958 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040955 5273 Angiosperm View MSA
122311542 5265 Fabidae View MSA
124066145 5270 Rosid View MSA
123747619 5271 Pentapetalae View MSA
122785648 5272 Eudicot View MSA
121348283 5274 Embryophyte View MSA
123428094 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.76        
cufflinks 1.653       High
cufflinks 1.202        
cufflinks 0.055     Low Low
cufflinks 1.865       High
cufflinks 0.08     Low Low
cufflinks 0.203        
cufflinks 0.907        
cufflinks 0.196        

0 Strain