Gene : Medtr8g097400 M. truncatula Mt4.0v1
Defline:  (1 of 25) PF04525 - LURP-one-related (LOR) Description:  tubby C 2 protein
Genomic Order:  5134 Name:  ? Medtr8g097400
Secondary Identifier:  ? PAC:31070212
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g097400 0.5kb upstream 0.5kb upstream 1425   true chr8: 40816834-40818258 Medicago truncatula
Medtr8g097400 0.5kb upstream 0.5kb upstream 500   false chr8: 40817759-40818258 Medicago truncatula
Medtr8g097400 0.5kb downstream 0.5kb downstream 1425   true chr8: 40816334-40817758 Medicago truncatula
Medtr8g097400 0.5kb downstream 0.5kb downstream 500   false chr8: 40816334-40816833 Medicago truncatula
Medtr8g097400 1.0kb upstream 1.0kb upstream 1925   true chr8: 40816834-40818758 Medicago truncatula
Medtr8g097400 1.0kb upstream 1.0kb upstream 1000   false chr8: 40817759-40818758 Medicago truncatula
Medtr8g097400 1.0kb downstream 1.0kb downstream 1925   true chr8: 40815834-40817758 Medicago truncatula
Medtr8g097400 1.0kb downstream 1.0kb downstream 1000   false chr8: 40815834-40816833 Medicago truncatula
Medtr8g097400 2.0kb upstream 2.0kb upstream 2925   true chr8: 40816834-40819758 Medicago truncatula
Medtr8g097400 2.0kb upstream 2.0kb upstream 2000   false chr8: 40817759-40819758 Medicago truncatula
Medtr8g097400 2.0kb downstream 2.0kb downstream 2925   true chr8: 40814834-40817758 Medicago truncatula
Medtr8g097400 2.0kb downstream 2.0kb downstream 2000   false chr8: 40814834-40816833 Medicago truncatula
Medtr8g097400 5.0kb upstream 5.0kb upstream 5925   true chr8: 40816834-40822758 Medicago truncatula
Medtr8g097400 5.0kb upstream 5.0kb upstream 5000   false chr8: 40817759-40822758 Medicago truncatula
Medtr8g097400 5.0kb downstream 5.0kb downstream 5925   true chr8: 40811834-40817758 Medicago truncatula
Medtr8g097400 5.0kb downstream 5.0kb downstream 5000   false chr8: 40811834-40816833 Medicago truncatula
Medtr8g097400 10.0kb upstream 10.0kb upstream 10925   true chr8: 40816834-40827758 Medicago truncatula
Medtr8g097400 10.0kb upstream 10.0kb upstream 10000   false chr8: 40817759-40827758 Medicago truncatula
Medtr8g097400 10.0kb downstream 10.0kb downstream 10925   true chr8: 40806834-40817758 Medicago truncatula
Medtr8g097400 10.0kb downstream 10.0kb downstream 10000   false chr8: 40806834-40816833 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305151 5265 Fabidae View MSA
124063316 5270 Rosid View MSA
123746736 5271 Pentapetalae View MSA
122786164 5272 Eudicot View MSA
122048996 5273 Angiosperm View MSA
121311201 5274 Embryophyte View MSA
123348527 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.445        
cufflinks 0.016     Low Low
cufflinks 0.073     Low  
cufflinks 0.845        
cufflinks 0.036     Low  
cufflinks 0.396        
cufflinks 1.477       High
cufflinks 0.025     Low Low
cufflinks 0.747        

0 Strain