Gene : Medtr8g097210 M. truncatula Mt4.0v1
Defline:  (1 of 14) PF01823 - MAC/Perforin domain (MACPF) Description:  MACPF domain protein
Genomic Order:  4264 Name:  ? Medtr8g097210
Secondary Identifier:  ? PAC:31069749
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g097210 0.5kb upstream 0.5kb upstream 6612   true chr8: 34883945-34890556 Medicago truncatula
Medtr8g097210 0.5kb upstream 0.5kb upstream 500   false chr8: 34890057-34890556 Medicago truncatula
Medtr8g097210 0.5kb downstream 0.5kb downstream 6612   true chr8: 34883445-34890056 Medicago truncatula
Medtr8g097210 0.5kb downstream 0.5kb downstream 500   false chr8: 34883445-34883944 Medicago truncatula
Medtr8g097210 1.0kb upstream 1.0kb upstream 7112   true chr8: 34883945-34891056 Medicago truncatula
Medtr8g097210 1.0kb upstream 1.0kb upstream 1000   false chr8: 34890057-34891056 Medicago truncatula
Medtr8g097210 1.0kb downstream 1.0kb downstream 7112   true chr8: 34882945-34890056 Medicago truncatula
Medtr8g097210 1.0kb downstream 1.0kb downstream 1000   false chr8: 34882945-34883944 Medicago truncatula
Medtr8g097210 2.0kb upstream 2.0kb upstream 8112   true chr8: 34883945-34892056 Medicago truncatula
Medtr8g097210 2.0kb upstream 2.0kb upstream 2000   false chr8: 34890057-34892056 Medicago truncatula
Medtr8g097210 2.0kb downstream 2.0kb downstream 8112   true chr8: 34881945-34890056 Medicago truncatula
Medtr8g097210 2.0kb downstream 2.0kb downstream 2000   false chr8: 34881945-34883944 Medicago truncatula
Medtr8g097210 5.0kb upstream 5.0kb upstream 11112   true chr8: 34883945-34895056 Medicago truncatula
Medtr8g097210 5.0kb upstream 5.0kb upstream 5000   false chr8: 34890057-34895056 Medicago truncatula
Medtr8g097210 5.0kb downstream 5.0kb downstream 11112   true chr8: 34878945-34890056 Medicago truncatula
Medtr8g097210 5.0kb downstream 5.0kb downstream 5000   false chr8: 34878945-34883944 Medicago truncatula
Medtr8g097210 10.0kb upstream 10.0kb upstream 16112   true chr8: 34883945-34900056 Medicago truncatula
Medtr8g097210 10.0kb upstream 10.0kb upstream 10000   false chr8: 34890057-34900056 Medicago truncatula
Medtr8g097210 10.0kb downstream 10.0kb downstream 16112   true chr8: 34873945-34890056 Medicago truncatula
Medtr8g097210 10.0kb downstream 10.0kb downstream 10000   false chr8: 34873945-34883944 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301501 5265 Fabidae View MSA
124070099 5270 Rosid View MSA
123749357 5271 Pentapetalae View MSA
122797493 5272 Eudicot View MSA
122048328 5273 Angiosperm View MSA
121310931 5274 Embryophyte View MSA
123348303 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.35        
cufflinks 1.198        
cufflinks 1.812        
cufflinks 0.713       Low
cufflinks 2.171       High
cufflinks 0.384       Low
cufflinks 1.505        
cufflinks 1.433        
cufflinks 1.684        

0 Strain