Gene : Medtr8g098445 M. truncatula Mt4.0v1
Defline:  (1 of 210) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Description:  PPR containing plant-like protein
Genomic Order:  5170 Name:  ? Medtr8g098445
Secondary Identifier:  ? PAC:31069478
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g098445 0.5kb upstream 0.5kb upstream 2508   true chr8: 41070736-41073243 Medicago truncatula
Medtr8g098445 0.5kb upstream 0.5kb upstream 500   false chr8: 41070736-41071235 Medicago truncatula
Medtr8g098445 0.5kb downstream 0.5kb downstream 2508   true chr8: 41071236-41073743 Medicago truncatula
Medtr8g098445 0.5kb downstream 0.5kb downstream 500   false chr8: 41073244-41073743 Medicago truncatula
Medtr8g098445 1.0kb upstream 1.0kb upstream 3008   true chr8: 41070236-41073243 Medicago truncatula
Medtr8g098445 1.0kb upstream 1.0kb upstream 1000   false chr8: 41070236-41071235 Medicago truncatula
Medtr8g098445 1.0kb downstream 1.0kb downstream 3008   true chr8: 41071236-41074243 Medicago truncatula
Medtr8g098445 1.0kb downstream 1.0kb downstream 1000   false chr8: 41073244-41074243 Medicago truncatula
Medtr8g098445 2.0kb upstream 2.0kb upstream 4008   true chr8: 41069236-41073243 Medicago truncatula
Medtr8g098445 2.0kb upstream 2.0kb upstream 2000   false chr8: 41069236-41071235 Medicago truncatula
Medtr8g098445 2.0kb downstream 2.0kb downstream 4008   true chr8: 41071236-41075243 Medicago truncatula
Medtr8g098445 2.0kb downstream 2.0kb downstream 2000   false chr8: 41073244-41075243 Medicago truncatula
Medtr8g098445 5.0kb upstream 5.0kb upstream 7008   true chr8: 41066236-41073243 Medicago truncatula
Medtr8g098445 5.0kb upstream 5.0kb upstream 5000   false chr8: 41066236-41071235 Medicago truncatula
Medtr8g098445 5.0kb downstream 5.0kb downstream 7008   true chr8: 41071236-41078243 Medicago truncatula
Medtr8g098445 5.0kb downstream 5.0kb downstream 5000   false chr8: 41073244-41078243 Medicago truncatula
Medtr8g098445 10.0kb upstream 10.0kb upstream 12008   true chr8: 41061236-41073243 Medicago truncatula
Medtr8g098445 10.0kb upstream 10.0kb upstream 10000   false chr8: 41061236-41071235 Medicago truncatula
Medtr8g098445 10.0kb downstream 10.0kb downstream 12008   true chr8: 41071236-41083243 Medicago truncatula
Medtr8g098445 10.0kb downstream 10.0kb downstream 10000   false chr8: 41073244-41083243 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309942 5265 Fabidae View MSA
124062138 5270 Rosid View MSA
123738772 5271 Pentapetalae View MSA
122795104 5272 Eudicot View MSA
122042665 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121309997 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.004        
cufflinks 5.185        
cufflinks 5.02        
cufflinks 3.274        
cufflinks 9.462       High
cufflinks 1.534       Low
cufflinks 5.578        
cufflinks 4.736        
cufflinks 5.227        

0 Strain