Gene : Medtr8g088190 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR12758:SF20 - PEPTIDASE-C1 DOMAIN-CONTAINING PROTEIN Description:  plant/F15D2-27 protein
Genomic Order:  4520 Name:  ? Medtr8g088190
Secondary Identifier:  ? PAC:31070080
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g088190 0.5kb upstream 0.5kb upstream 7463   true chr8: 36515008-36522470 Medicago truncatula
Medtr8g088190 0.5kb upstream 0.5kb upstream 500   false chr8: 36515008-36515507 Medicago truncatula
Medtr8g088190 0.5kb downstream 0.5kb downstream 7463   true chr8: 36515508-36522970 Medicago truncatula
Medtr8g088190 0.5kb downstream 0.5kb downstream 500   false chr8: 36522471-36522970 Medicago truncatula
Medtr8g088190 1.0kb upstream 1.0kb upstream 7963   true chr8: 36514508-36522470 Medicago truncatula
Medtr8g088190 1.0kb upstream 1.0kb upstream 1000   false chr8: 36514508-36515507 Medicago truncatula
Medtr8g088190 1.0kb downstream 1.0kb downstream 7963   true chr8: 36515508-36523470 Medicago truncatula
Medtr8g088190 1.0kb downstream 1.0kb downstream 1000   false chr8: 36522471-36523470 Medicago truncatula
Medtr8g088190 2.0kb upstream 2.0kb upstream 8963   true chr8: 36513508-36522470 Medicago truncatula
Medtr8g088190 2.0kb upstream 2.0kb upstream 2000   false chr8: 36513508-36515507 Medicago truncatula
Medtr8g088190 2.0kb downstream 2.0kb downstream 8963   true chr8: 36515508-36524470 Medicago truncatula
Medtr8g088190 2.0kb downstream 2.0kb downstream 2000   false chr8: 36522471-36524470 Medicago truncatula
Medtr8g088190 5.0kb upstream 5.0kb upstream 11963   true chr8: 36510508-36522470 Medicago truncatula
Medtr8g088190 5.0kb upstream 5.0kb upstream 5000   false chr8: 36510508-36515507 Medicago truncatula
Medtr8g088190 5.0kb downstream 5.0kb downstream 11963   true chr8: 36515508-36527470 Medicago truncatula
Medtr8g088190 5.0kb downstream 5.0kb downstream 5000   false chr8: 36522471-36527470 Medicago truncatula
Medtr8g088190 10.0kb upstream 10.0kb upstream 16963   true chr8: 36505508-36522470 Medicago truncatula
Medtr8g088190 10.0kb upstream 10.0kb upstream 10000   false chr8: 36505508-36515507 Medicago truncatula
Medtr8g088190 10.0kb downstream 10.0kb downstream 16963   true chr8: 36515508-36532470 Medicago truncatula
Medtr8g088190 10.0kb downstream 10.0kb downstream 10000   false chr8: 36522471-36532470 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300528 5265 Fabidae View MSA
124065428 5270 Rosid View MSA
123746895 5271 Pentapetalae View MSA
122790736 5272 Eudicot View MSA
122047754 5273 Angiosperm View MSA
121350111 5274 Embryophyte View MSA
123424635 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 67.85     High High
cufflinks 30.033     High  
cufflinks 50.544     High High
cufflinks 35.072     High  
cufflinks 28.758     High  
cufflinks 26.803     High Low
cufflinks 35.19     High  
cufflinks 39.235     High  
cufflinks 31.755     High  

0 Strain