Gene : Medtr8g088270 M. truncatula Mt4.0v1
Defline:  (1 of 25) PTHR11353 - CHAPERONIN Description:  TCP-1/cpn60 chaperonin family protein
Genomic Order:  4527 Name:  ? Medtr8g088270
Secondary Identifier:  ? PAC:31071192
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g088270 0.5kb upstream 0.5kb upstream 9214   true chr8: 36546870-36556083 Medicago truncatula
Medtr8g088270 0.5kb upstream 0.5kb upstream 500   false chr8: 36555584-36556083 Medicago truncatula
Medtr8g088270 0.5kb downstream 0.5kb downstream 9214   true chr8: 36546370-36555583 Medicago truncatula
Medtr8g088270 0.5kb downstream 0.5kb downstream 500   false chr8: 36546370-36546869 Medicago truncatula
Medtr8g088270 1.0kb upstream 1.0kb upstream 9714   true chr8: 36546870-36556583 Medicago truncatula
Medtr8g088270 1.0kb upstream 1.0kb upstream 1000   false chr8: 36555584-36556583 Medicago truncatula
Medtr8g088270 1.0kb downstream 1.0kb downstream 9714   true chr8: 36545870-36555583 Medicago truncatula
Medtr8g088270 1.0kb downstream 1.0kb downstream 1000   false chr8: 36545870-36546869 Medicago truncatula
Medtr8g088270 2.0kb upstream 2.0kb upstream 10714   true chr8: 36546870-36557583 Medicago truncatula
Medtr8g088270 2.0kb upstream 2.0kb upstream 2000   false chr8: 36555584-36557583 Medicago truncatula
Medtr8g088270 2.0kb downstream 2.0kb downstream 10714   true chr8: 36544870-36555583 Medicago truncatula
Medtr8g088270 2.0kb downstream 2.0kb downstream 2000   false chr8: 36544870-36546869 Medicago truncatula
Medtr8g088270 5.0kb upstream 5.0kb upstream 13714   true chr8: 36546870-36560583 Medicago truncatula
Medtr8g088270 5.0kb upstream 5.0kb upstream 5000   false chr8: 36555584-36560583 Medicago truncatula
Medtr8g088270 5.0kb downstream 5.0kb downstream 13714   true chr8: 36541870-36555583 Medicago truncatula
Medtr8g088270 5.0kb downstream 5.0kb downstream 5000   false chr8: 36541870-36546869 Medicago truncatula
Medtr8g088270 10.0kb upstream 10.0kb upstream 18714   true chr8: 36546870-36565583 Medicago truncatula
Medtr8g088270 10.0kb upstream 10.0kb upstream 10000   false chr8: 36555584-36565583 Medicago truncatula
Medtr8g088270 10.0kb downstream 10.0kb downstream 18714   true chr8: 36536870-36555583 Medicago truncatula
Medtr8g088270 10.0kb downstream 10.0kb downstream 10000   false chr8: 36536870-36546869 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308396 5265 Fabidae View MSA
124067300 5270 Rosid View MSA
123737840 5271 Pentapetalae View MSA
122792769 5272 Eudicot View MSA
122046551 5273 Angiosperm View MSA
121345633 5274 Embryophyte View MSA
123423902 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.484        
cufflinks 3.052        
cufflinks 2.726        
cufflinks 2.461        
cufflinks 7.343       High
cufflinks 1.982       Low
cufflinks 4.23        
cufflinks 2.552        
cufflinks 7.185       High

0 Strain