Gene : Medtr8g088060 M. truncatula Mt4.0v1
Defline:  (1 of 2) KOG0004 - Ubiquitin/40S ribosomal protein S27a fusion Description:  ubiquitin-40S ribosomal S27a-like protein
Genomic Order:  4511 Name:  ? Medtr8g088060
Secondary Identifier:  ? PAC:31070245
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g088060 0.5kb upstream 0.5kb upstream 1472   true chr8: 36459311-36460782 Medicago truncatula
Medtr8g088060 0.5kb upstream 0.5kb upstream 500   false chr8: 36459311-36459810 Medicago truncatula
Medtr8g088060 0.5kb downstream 0.5kb downstream 1472   true chr8: 36459811-36461282 Medicago truncatula
Medtr8g088060 0.5kb downstream 0.5kb downstream 500   false chr8: 36460783-36461282 Medicago truncatula
Medtr8g088060 1.0kb upstream 1.0kb upstream 1972   true chr8: 36458811-36460782 Medicago truncatula
Medtr8g088060 1.0kb upstream 1.0kb upstream 1000   false chr8: 36458811-36459810 Medicago truncatula
Medtr8g088060 1.0kb downstream 1.0kb downstream 1972   true chr8: 36459811-36461782 Medicago truncatula
Medtr8g088060 1.0kb downstream 1.0kb downstream 1000   false chr8: 36460783-36461782 Medicago truncatula
Medtr8g088060 2.0kb upstream 2.0kb upstream 2972   true chr8: 36457811-36460782 Medicago truncatula
Medtr8g088060 2.0kb upstream 2.0kb upstream 2000   false chr8: 36457811-36459810 Medicago truncatula
Medtr8g088060 2.0kb downstream 2.0kb downstream 2972   true chr8: 36459811-36462782 Medicago truncatula
Medtr8g088060 2.0kb downstream 2.0kb downstream 2000   false chr8: 36460783-36462782 Medicago truncatula
Medtr8g088060 5.0kb upstream 5.0kb upstream 5972   true chr8: 36454811-36460782 Medicago truncatula
Medtr8g088060 5.0kb upstream 5.0kb upstream 5000   false chr8: 36454811-36459810 Medicago truncatula
Medtr8g088060 5.0kb downstream 5.0kb downstream 5972   true chr8: 36459811-36465782 Medicago truncatula
Medtr8g088060 5.0kb downstream 5.0kb downstream 5000   false chr8: 36460783-36465782 Medicago truncatula
Medtr8g088060 10.0kb upstream 10.0kb upstream 10972   true chr8: 36449811-36460782 Medicago truncatula
Medtr8g088060 10.0kb upstream 10.0kb upstream 10000   false chr8: 36449811-36459810 Medicago truncatula
Medtr8g088060 10.0kb downstream 10.0kb downstream 10972   true chr8: 36459811-36470782 Medicago truncatula
Medtr8g088060 10.0kb downstream 10.0kb downstream 10000   false chr8: 36460783-36470782 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306613 5265 Fabidae View MSA
124071954 5270 Rosid View MSA
123736823 5271 Pentapetalae View MSA
122788692 5272 Eudicot View MSA
122045257 5273 Angiosperm View MSA
121350332 5274 Embryophyte View MSA
123424740 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 131.295     High Low
cufflinks 172.879     High  
cufflinks 183.41     High  
cufflinks 744.37     High High
cufflinks 275.478     High  
cufflinks 424.338     High  
cufflinks 302.464     High  
cufflinks 213.262     High  
cufflinks 536.617     High High

0 Strain