Gene : Medtr8g087860 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR11945:SF150 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL1-RELATED Description:  MADS-box transcription factor
Genomic Order:  4497 Name:  ? Medtr8g087860
Secondary Identifier:  ? PAC:31075006
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g087860 0.5kb upstream 0.5kb upstream 5038   true chr8: 36349663-36354700 Medicago truncatula
Medtr8g087860 0.5kb upstream 0.5kb upstream 500   false chr8: 36349663-36350162 Medicago truncatula
Medtr8g087860 0.5kb downstream 0.5kb downstream 5038   true chr8: 36350163-36355200 Medicago truncatula
Medtr8g087860 0.5kb downstream 0.5kb downstream 500   false chr8: 36354701-36355200 Medicago truncatula
Medtr8g087860 1.0kb upstream 1.0kb upstream 5538   true chr8: 36349163-36354700 Medicago truncatula
Medtr8g087860 1.0kb upstream 1.0kb upstream 1000   false chr8: 36349163-36350162 Medicago truncatula
Medtr8g087860 1.0kb downstream 1.0kb downstream 5538   true chr8: 36350163-36355700 Medicago truncatula
Medtr8g087860 1.0kb downstream 1.0kb downstream 1000   false chr8: 36354701-36355700 Medicago truncatula
Medtr8g087860 2.0kb upstream 2.0kb upstream 6538   true chr8: 36348163-36354700 Medicago truncatula
Medtr8g087860 2.0kb upstream 2.0kb upstream 2000   false chr8: 36348163-36350162 Medicago truncatula
Medtr8g087860 2.0kb downstream 2.0kb downstream 6538   true chr8: 36350163-36356700 Medicago truncatula
Medtr8g087860 2.0kb downstream 2.0kb downstream 2000   false chr8: 36354701-36356700 Medicago truncatula
Medtr8g087860 5.0kb upstream 5.0kb upstream 9538   true chr8: 36345163-36354700 Medicago truncatula
Medtr8g087860 5.0kb upstream 5.0kb upstream 5000   false chr8: 36345163-36350162 Medicago truncatula
Medtr8g087860 5.0kb downstream 5.0kb downstream 9538   true chr8: 36350163-36359700 Medicago truncatula
Medtr8g087860 5.0kb downstream 5.0kb downstream 5000   false chr8: 36354701-36359700 Medicago truncatula
Medtr8g087860 10.0kb upstream 10.0kb upstream 14538   true chr8: 36340163-36354700 Medicago truncatula
Medtr8g087860 10.0kb upstream 10.0kb upstream 10000   false chr8: 36340163-36350162 Medicago truncatula
Medtr8g087860 10.0kb downstream 10.0kb downstream 14538   true chr8: 36350163-36364700 Medicago truncatula
Medtr8g087860 10.0kb downstream 10.0kb downstream 10000   false chr8: 36354701-36364700 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311895 5265 Fabidae View MSA
124063483 5270 Rosid View MSA
123747867 5271 Pentapetalae View MSA
122793842 5272 Eudicot View MSA
122049629 5273 Angiosperm View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.031     Low  
cufflinks 0.045     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.038     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.003     Low Low
cufflinks 0.061     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain