Gene : Medtr8g087820 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR28141:SF1 - 2',3'-CYCLIC-NUCLEOTIDE 3'-PHOSPHODIESTERASE Description:  cyclic phosphodiesterase-like protein
Genomic Order:  4494 Name:  ? Medtr8g087820
Secondary Identifier:  ? PAC:31071249
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g087820 0.5kb upstream 0.5kb upstream 2351   true chr8: 36332850-36335200 Medicago truncatula
Medtr8g087820 0.5kb upstream 0.5kb upstream 500   false chr8: 36332850-36333349 Medicago truncatula
Medtr8g087820 0.5kb downstream 0.5kb downstream 2351   true chr8: 36333350-36335700 Medicago truncatula
Medtr8g087820 0.5kb downstream 0.5kb downstream 500   false chr8: 36335201-36335700 Medicago truncatula
Medtr8g087820 1.0kb upstream 1.0kb upstream 2851   true chr8: 36332350-36335200 Medicago truncatula
Medtr8g087820 1.0kb upstream 1.0kb upstream 1000   false chr8: 36332350-36333349 Medicago truncatula
Medtr8g087820 1.0kb downstream 1.0kb downstream 2851   true chr8: 36333350-36336200 Medicago truncatula
Medtr8g087820 1.0kb downstream 1.0kb downstream 1000   false chr8: 36335201-36336200 Medicago truncatula
Medtr8g087820 2.0kb upstream 2.0kb upstream 3851   true chr8: 36331350-36335200 Medicago truncatula
Medtr8g087820 2.0kb upstream 2.0kb upstream 2000   false chr8: 36331350-36333349 Medicago truncatula
Medtr8g087820 2.0kb downstream 2.0kb downstream 3851   true chr8: 36333350-36337200 Medicago truncatula
Medtr8g087820 2.0kb downstream 2.0kb downstream 2000   false chr8: 36335201-36337200 Medicago truncatula
Medtr8g087820 5.0kb upstream 5.0kb upstream 6851   true chr8: 36328350-36335200 Medicago truncatula
Medtr8g087820 5.0kb upstream 5.0kb upstream 5000   false chr8: 36328350-36333349 Medicago truncatula
Medtr8g087820 5.0kb downstream 5.0kb downstream 6851   true chr8: 36333350-36340200 Medicago truncatula
Medtr8g087820 5.0kb downstream 5.0kb downstream 5000   false chr8: 36335201-36340200 Medicago truncatula
Medtr8g087820 10.0kb upstream 10.0kb upstream 11851   true chr8: 36323350-36335200 Medicago truncatula
Medtr8g087820 10.0kb upstream 10.0kb upstream 10000   false chr8: 36323350-36333349 Medicago truncatula
Medtr8g087820 10.0kb downstream 10.0kb downstream 11851   true chr8: 36333350-36345200 Medicago truncatula
Medtr8g087820 10.0kb downstream 10.0kb downstream 10000   false chr8: 36335201-36345200 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302136 5265 Fabidae View MSA
124065513 5270 Rosid View MSA
123741302 5271 Pentapetalae View MSA
122793487 5272 Eudicot View MSA
122041561 5273 Angiosperm View MSA
123429145 5275 Viridiplantae View MSA
121349919 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.618        
cufflinks 2.612        
cufflinks 2.342        
cufflinks 3.974        
cufflinks 2.405        
cufflinks 2.616        
cufflinks 4.225        
cufflinks 1.988       Low
cufflinks 6.944       High

0 Strain