Gene : Medtr8g088800 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR21650:SF2 - KINETOCHORE PROTEIN NUF2 Description:  kinetochore Nuf2-like protein
Genomic Order:  4569 Name:  ? Medtr8g088800
Secondary Identifier:  ? PAC:31074806
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g088800 0.5kb upstream 0.5kb upstream 4825   true chr8: 36888274-36893098 Medicago truncatula
Medtr8g088800 0.5kb upstream 0.5kb upstream 500   false chr8: 36892599-36893098 Medicago truncatula
Medtr8g088800 0.5kb downstream 0.5kb downstream 4825   true chr8: 36887774-36892598 Medicago truncatula
Medtr8g088800 0.5kb downstream 0.5kb downstream 500   false chr8: 36887774-36888273 Medicago truncatula
Medtr8g088800 1.0kb upstream 1.0kb upstream 5325   true chr8: 36888274-36893598 Medicago truncatula
Medtr8g088800 1.0kb upstream 1.0kb upstream 1000   false chr8: 36892599-36893598 Medicago truncatula
Medtr8g088800 1.0kb downstream 1.0kb downstream 5325   true chr8: 36887274-36892598 Medicago truncatula
Medtr8g088800 1.0kb downstream 1.0kb downstream 1000   false chr8: 36887274-36888273 Medicago truncatula
Medtr8g088800 2.0kb upstream 2.0kb upstream 6325   true chr8: 36888274-36894598 Medicago truncatula
Medtr8g088800 2.0kb upstream 2.0kb upstream 2000   false chr8: 36892599-36894598 Medicago truncatula
Medtr8g088800 2.0kb downstream 2.0kb downstream 6325   true chr8: 36886274-36892598 Medicago truncatula
Medtr8g088800 2.0kb downstream 2.0kb downstream 2000   false chr8: 36886274-36888273 Medicago truncatula
Medtr8g088800 5.0kb upstream 5.0kb upstream 9325   true chr8: 36888274-36897598 Medicago truncatula
Medtr8g088800 5.0kb upstream 5.0kb upstream 5000   false chr8: 36892599-36897598 Medicago truncatula
Medtr8g088800 5.0kb downstream 5.0kb downstream 9325   true chr8: 36883274-36892598 Medicago truncatula
Medtr8g088800 5.0kb downstream 5.0kb downstream 5000   false chr8: 36883274-36888273 Medicago truncatula
Medtr8g088800 10.0kb upstream 10.0kb upstream 14325   true chr8: 36888274-36902598 Medicago truncatula
Medtr8g088800 10.0kb upstream 10.0kb upstream 10000   false chr8: 36892599-36902598 Medicago truncatula
Medtr8g088800 10.0kb downstream 10.0kb downstream 14325   true chr8: 36878274-36892598 Medicago truncatula
Medtr8g088800 10.0kb downstream 10.0kb downstream 10000   false chr8: 36878274-36888273 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122269611 5265 Fabidae Singleton cluster - no MSA
124070020 5270 Rosid View MSA
123741477 5271 Pentapetalae View MSA
122794633 5272 Eudicot View MSA
122050952 5273 Angiosperm View MSA
121351685 5274 Embryophyte View MSA
123425820 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.407        
cufflinks 0.445        
cufflinks 0.576        
cufflinks 0.054     Low Low
cufflinks 1.121       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.303        
cufflinks 0.488        
cufflinks 0.129        

0 Strain