Gene : Medtr8g088790 M. truncatula Mt4.0v1
Defline:  (1 of 2) 2.1.2.10 - Aminomethyltransferase / Tetrahydrofolate aminomethyltransferase Description:  glycine cleavage T-protein aminomethyltransferase
Genomic Order:  4568 Name:  ? Medtr8g088790
Secondary Identifier:  ? PAC:31076483
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula GLYCLEAV-PWY Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g088790 0.5kb upstream 0.5kb upstream 6882   true chr8: 36879713-36886594 Medicago truncatula
Medtr8g088790 0.5kb upstream 0.5kb upstream 500   false chr8: 36886095-36886594 Medicago truncatula
Medtr8g088790 0.5kb downstream 0.5kb downstream 6882   true chr8: 36879213-36886094 Medicago truncatula
Medtr8g088790 0.5kb downstream 0.5kb downstream 500   false chr8: 36879213-36879712 Medicago truncatula
Medtr8g088790 1.0kb upstream 1.0kb upstream 7382   true chr8: 36879713-36887094 Medicago truncatula
Medtr8g088790 1.0kb upstream 1.0kb upstream 1000   false chr8: 36886095-36887094 Medicago truncatula
Medtr8g088790 1.0kb downstream 1.0kb downstream 7382   true chr8: 36878713-36886094 Medicago truncatula
Medtr8g088790 1.0kb downstream 1.0kb downstream 1000   false chr8: 36878713-36879712 Medicago truncatula
Medtr8g088790 2.0kb upstream 2.0kb upstream 8382   true chr8: 36879713-36888094 Medicago truncatula
Medtr8g088790 2.0kb upstream 2.0kb upstream 2000   false chr8: 36886095-36888094 Medicago truncatula
Medtr8g088790 2.0kb downstream 2.0kb downstream 8382   true chr8: 36877713-36886094 Medicago truncatula
Medtr8g088790 2.0kb downstream 2.0kb downstream 2000   false chr8: 36877713-36879712 Medicago truncatula
Medtr8g088790 5.0kb upstream 5.0kb upstream 11382   true chr8: 36879713-36891094 Medicago truncatula
Medtr8g088790 5.0kb upstream 5.0kb upstream 5000   false chr8: 36886095-36891094 Medicago truncatula
Medtr8g088790 5.0kb downstream 5.0kb downstream 11382   true chr8: 36874713-36886094 Medicago truncatula
Medtr8g088790 5.0kb downstream 5.0kb downstream 5000   false chr8: 36874713-36879712 Medicago truncatula
Medtr8g088790 10.0kb upstream 10.0kb upstream 16382   true chr8: 36879713-36896094 Medicago truncatula
Medtr8g088790 10.0kb upstream 10.0kb upstream 10000   false chr8: 36886095-36896094 Medicago truncatula
Medtr8g088790 10.0kb downstream 10.0kb downstream 16382   true chr8: 36869713-36886094 Medicago truncatula
Medtr8g088790 10.0kb downstream 10.0kb downstream 10000   false chr8: 36869713-36879712 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307093 5265 Fabidae View MSA
124066911 5270 Rosid View MSA
123736787 5271 Pentapetalae View MSA
122786852 5272 Eudicot View MSA
122044348 5273 Angiosperm View MSA
121345133 5274 Embryophyte View MSA
123423881 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.463        
cufflinks 3.135       High
cufflinks 2.84        
cufflinks 0.267       Low
cufflinks 3.186       High
cufflinks 0.432        
cufflinks 0.452        
cufflinks 2.695        
cufflinks 0.55        

0 Strain